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Report for CCDS49735.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49735.1 Public Mus musculus 15 Krt83 23 108 98 CCDS HistoryNCBI Gene:100126226Re-query CCDS DB by CCDS ID:49735.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49735.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023718.8 ENSMUSP00000023718.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023718.8Link to Ensembl Protein Viewer:ENSMUSP00000023718.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000023718Re-query CCDS DB by Protein ID:ENSMUSP00000023718
Original member Current member NCBI NM_001201323.1 NP_001188252.1 Accepted alive Link to Nucleotide Sequence:NM_001201323.1Link to Protein Sequence:NP_001188252.1Re-query CCDS DB by Nucleotide ID:NM_001201323Re-query CCDS DB by Protein ID:NP_001188252Link to BLAST:NP_001188252.1

Chromosomal Locations for CCDS 49735.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 101485384 101485550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101485982 101486013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101486973 101487193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101487470 101487595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101487819 101487983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101488150 101488245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101488372 101488432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101489584 101489792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101491087 101491449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1440 nt):
ATGACCTGTGGCTTTCGAACTGGAAACTTCAGCTGCGCCTCAGCCTGCGGGCCCCGGCCTGGCCGCTGCT
GCATCTCTGCAGCTCCCTACAGGGGCATCTCCTGCTACCGAGGACTCTCAGGGGGCTTCGGCAGCCAGAG
TGTCTGTGGGGCCTTCCGCTCCGGCTCCTGTGGACGCAGCTTCGGGTACCGATCTGGAGGCATCTGCGGG
CCCAGCCCACCCTGCATCACCACCGTCTCTGTCAATGAGAGCCTGCTCACACCCCTGAACCTGGAGATCG
ACCCCAATGCTCAGTGTGTGAAGCATGAGGAGAAAGAGCAGATCAAGTGTCTCAACAGCAGGTTCGCGGC
CTTCATCGACAAGGTGCGCTTCCTGGAGCAGCAGAACAAGCTGCTGGAGACCAAGTGGCAGTTCTACCAG
AACCGCAAGTGCTGTGAGAGCAACATGGAGCCTCTGTTCGAGGGCTACATCGAGACGCTGAGGCGGGAGG
CTGAGTGTGTGGAGGCCGACAGCGGGAGGCTGGCTGCTGAGCTCAACCATGCGCAGGAGTCCATGGAGGG
CTACAAGAAGAGGTATGAAGAAGAAGTTGCACTCCGGGCCACAGCAGAGAATGAGTTTGTGGCTCTAAAG
AAGGATGTGGACTGTGCCTACCTGCGCAAGTCAGATCTGGAGGCCAACGCAGAGGCTCTGACCCAAGAGA
CCGACTTCCTGAGGAGAATGTATGATGAGGAGACCCGCATCCTCCATTCCCACATCTCAGACACATCTGT
CATCGTCAAGATGGACAACAGCCGGGACCTGAACATGGACTGTGTCGTGGCTGAGATCAAGGCTCAGTAT
GATGACATTGCCAGCCGCAGCCGTGCTGAGGCCGAGTCCTGGTACCGCACCAAGTGTGAGGAGATGAAGG
CCACAGTGATCCGGCATGGAGAGACTCTGCGCCGCACCAGAGAGGAGATCAATGAGCTGAACAGAATGAT
CCAGAGGCTGACTGCTGAGATCGAGAATGCCAAGTGCCAGAACACCAAGCTGGAGGCTGCTGTGACCCAA
TCTGAGCAGCAGGGAGAGGCTGCCCTTGCTGATGCCCGCTGCAAGCTGGCTGAGTTGGAGGGTGCCCTGC
AGAAGGCTAAGCAGGACATGGCCTGCCTGCTCAAGGAGTACCAGGAGGTGATGAACTCCAAGCTGGGGCT
GGACGTGGAGATCATCACCTACAGGCGCCTGCTGGAGGGCGAGGAGCAGAGGCTGTGTGAAGGCGTGGGA
GCTGTGAATGTCTGTGTCAGCAGCTCCCGTGGTGGAGTTGTGTGCGGGGACCTCTGTGTGTCTGGCTCAC
GGCCTGTGACAGGCAGTGTCTGCAGTGCCCCATGCAGCGGGAATGTGGCAGTAAGCACTGGCCTGTGTGC
GCCCTGTGGAAGCGGCCCTTGTCACCCGGGGAGGTGTTAG

Translation (479 aa):
MTCGFRTGNFSCASACGPRPGRCCISAAPYRGISCYRGLSGGFGSQSVCGAFRSGSCGRSFGYRSGGICG
PSPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKCLNSRFAAFIDKVRFLEQQNKLLETKWQFYQ
NRKCCESNMEPLFEGYIETLRREAECVEADSGRLAAELNHAQESMEGYKKRYEEEVALRATAENEFVALK
KDVDCAYLRKSDLEANAEALTQETDFLRRMYDEETRILHSHISDTSVIVKMDNSRDLNMDCVVAEIKAQY
DDIASRSRAEAESWYRTKCEEMKATVIRHGETLRRTREEINELNRMIQRLTAEIENAKCQNTKLEAAVTQ
SEQQGEAALADARCKLAELEGALQKAKQDMACLLKEYQEVMNSKLGLDVEIITYRRLLEGEEQRLCEGVG
AVNVCVSSSRGGVVCGDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGSGPCHPGRC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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