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Report for CCDS2454.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2454.1 Public Homo sapiens 2 FARSB 24 110 108 CCDS HistoryNCBI Gene:10056Re-query CCDS DB by CCDS ID:2454.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2454.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000281828.8 ENSP00000281828.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000281828.8Link to Ensembl Protein Viewer:ENSP00000281828.6Re-query CCDS DB by Nucleotide ID:ENST00000281828Re-query CCDS DB by Protein ID:ENSP00000281828
Original member Current member NCBI NM_005687.5 NP_005678.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005687.5Link to Protein Sequence:NP_005678.3Re-query CCDS DB by Nucleotide ID:NM_005687Re-query CCDS DB by Protein ID:NP_005678Link to BLAST:NP_005678.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005678.3 589 Q9NSD9-1 589 100% 0 0

Chromosomal Locations for CCDS 2454.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 222571871 222572022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222599928 222600083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222613811 222613928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222619645 222619737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222623650 222623730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222624272 222624479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222624714 222624775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222628837 222628888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222630113 222630174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222631604 222631674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222633199 222633307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222634391 222634541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222639580 222639695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222640862 222640931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222642851 222643005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222648740 222648795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222656016 222656073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1770 nt):
ATGCCGACTGTCAGCGTGAAGCGTGATCTGCTCTTCCAAGCCCTGGGCCGCACCTACACTGACGAAGAAT
TTGATGAACTATGTTTTGAATTTGGTCTGGAGCTTGATGAAATTACATCTGAGAAGGAAATAATAAGTAA
AGAACAAGGTAATGTAAAGGCAGCAGGAGCCTCTGATGTTGTTCTTTACAAAATTGACGTCCCTGCCAAT
AGATATGATCTCCTGTGTCTGGAAGGATTGGTTCGAGGACTTCAGGTCTTCAAAGAAAGGATAAAGGCTC
CAGTGTATAAACGGGTAATGCCTGATGGAAAAATCCAGAAATTGATTATCACAGAAGAGACAGCTAAGAT
ACGTCCTTTTGCGGTAGCAGCAGTTCTCCGTAATATAAAGTTTACTAAAGATCGATATGACAGCTTCATT
GAACTTCAGGAGAAATTACATCAGAATATTTGCAGGAAAAGAGCACTGGTTGCCATTGGTACCCATGATT
TGGACACTTTGTCGGGCCCATTTACTTATACTGCAAAGCGTCCTTCAGATATCAAATTCAAGCCTCTAAA
TAAGACCAAGGAGTATACAGCCTGTGAACTGATGAACATATACAAGACTGACAATCACCTGAAACATTAT
TTACATATCATTGAAAACAAACCCCTGTATCCAGTTATCTATGATAGCAATGGTGTCGTCCTTTCAATGC
CTCCCATCATCAATGGGGATCATTCCAGAATAACAGTAAATACTAGAAATATTTTTATTGAATGCACGGG
AACTGACTTTACTAAGGCAAAAATAGTTCTTGATATTATTGTCACCATGTTCAGTGAATATTGTGAGAAT
CAATTTACGGTCGAAGCTGCTGAAGTGGTTTTTCCTAATGGAAAATCACATACCTTTCCAGAATTAGCTT
ACCGAAAGGAGATGGTGAGAGCTGACCTAATTAACAAAAAAGTTGGAATCAGAGAAACTCCAGAAAATCT
TGCCAAACTTCTGACCAGGATGTATTTAAAATCAGAAGTCATAGGTGATGGGAATCAGATTGAGATTGAA
ATCCCTCCAACCAGAGCTGACATTATCCATGCATGTGATATTGTAGAAGATGCAGCTATTGCTTATGGAT
ATAACAACATTCAGATGACTCTCCCGAAAACTTACACCATAGCTAATCAATTTCCTCTTAATAAGCTCAC
TGAACTTCTCCGACATGACATGGCAGCCGCTGGCTTCACTGAAGCACTTACCTTTGCCCTGTGCTCCCAA
GAAGATATTGCTGATAAACTAGGTGTGGATATCTCTGCAACAAAGGCAGTCCACATAAGTAATCCTAAAA
CAGCTGAATTTCAGGTGGCACGCACTACCCTTCTTCCTGGCCTCCTGAAGACCATAGCAGCAAATCGTAA
GATGCCCCTTCCACTGAAACTGTTTGAAATCTCTGACATTGTAATAAAAGATTCTAATACAGATGTAGGT
GCAAAAAACTACAGACATCTCTGTGCTGTTTATTACAACAAGAATCCTGGGTTTGAGATCATTCATGGGC
TGCTGGACAGAATTATGCAGTTGCTCGATGTGCCTCCTGGTGAAGACAAGGGGGGATATGTGATCAAAGC
ATCAGAAGGGCCTGCTTTCTTCCCCGGGCGATGTGCAGAGATCTTTGCCAGGGGTCAAAGCGTCGGGAAG
CTTGGGGTCCTTCATCCTGACGTTATCACCAAATTTGAGCTGACCATGCCCTGCTCCTCCCTAGAAATCA
ATGTTGGACCCTTTTTGTGA

Translation (589 aa):
MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAAGASDVVLYKIDVPAN
RYDLLCLEGLVRGLQVFKERIKAPVYKRVMPDGKIQKLIITEETAKIRPFAVAAVLRNIKFTKDRYDSFI
ELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHLKHY
LHIIENKPLYPVIYDSNGVVLSMPPIINGDHSRITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEYCEN
QFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIE
IPPTRADIIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQ
EDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDIVIKDSNTDVG
AKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPGEDKGGYVIKASEGPAFFPGRCAEIFARGQSVGK
LGVLHPDVITKFELTMPCSSLEINVGPFL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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