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Report for CCDS22610.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22610.1 Public Mus musculus 8 Enkd1 23 108 98 CCDS HistoryNCBI Gene:102124Re-query CCDS DB by CCDS ID:22610.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22610.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000013299.10 ENSMUSP00000013299.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000013299.10Link to Ensembl Protein Viewer:ENSMUSP00000013299.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000013299Re-query CCDS DB by Protein ID:ENSMUSP00000013299
Original member Current member NCBI NM_198299.2 NP_938041.1 Accepted alive Link to Nucleotide Sequence:NM_198299.2Link to Protein Sequence:NP_938041.1Re-query CCDS DB by Nucleotide ID:NM_198299Re-query CCDS DB by Protein ID:NP_938041Link to BLAST:NP_938041.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_938041.1 346 Q7TSV9 346 100% 0 0

Chromosomal Locations for CCDS 22610.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 105703861 105704021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105704113 105704249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105704351 105704514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105704635 105704760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105706566 105706738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105707549 105707743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105707824 105707908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1041 nt):
ATGTGCGAGGGCCCGTCCCGCATCTCTGGACCCATCCCCCCAGACCCCACTCTCTGCCCGGACTACTACC
GG
CGGCCGGCCTCGGCCCAAGGACGCCTGGAAGGAAACGCGTTGAAGCTGGACCTGCTGACTTCAGGTCG
G
GACCTGGACTCCAGTCCTCCTCGTGGCCCTCGCATCAGGCCTGAAGCCCGAGAGATCCTAGAGCGTGGC
CAG
CGAGGCGTGGGGGACGTGCTGCTGCAACTGGGGTGCATCTCCCTCGGTTCGGGGGTCTCTCCTAAGA
GG
AAGAATCCAAAGGACCATGAGAAGGAAAACTTGAGGCGGATCAAAGAGATTCAGAGGCGCTTCCAAGA
C
CAGGAACGCAGCCGGGAACAGGGTCAGCCTAAGCCACTGAAGGCACTGTGGCGCTCACCCAAGTATGAC
AAT
GTGGAGTCTCGAGTCAAGGCCAGGATGAAGGAGCTTGGCCCCACCTCTGTGACAGAACCTGCCCACT
TT
CTGCGGGCACACTCCCGCTGTGGCCCTGGGCTCCCACCATCCCGTGCCTCCAGTCCTCAGCTCGCCCT
T
CCAGGTCCCCAAGCTAAGGGACCCGGCCTAGGCGTGGATTTCATTAGTCGCAACGCCCTAGCTGCCAAG
AGA
GCCCCCCGGCGCCACTCCCGCTCCCTGCAGGTCCTTGCACAGGTTCAGGAACAGCAGCGCCAAGCCC
AG
GAGCGCTACAACGCCACGCAGAAAGGCCATGTGCCCCATTACTTGTTGGAACGCAGGGACCTGTGGCG
G
AAGGAAGCGGAAGCTCGCCAGCGTAGCCAGCCAGACCCGTCCATGCCCCCGGGCCACACACTCATGCCT
GAG
AATCAGCGGCTGGAGACCCTGAACAATCTGCTACAAAGCCAGAGCCAGCTGCTACGTGAGCTAGTAC
TA
TTACCTGCTGGGGCAGACTCGCTGAGAGCCCAGGGTCATCGTGCTGAACTGGACCGGAAGTTGGTGCA
A
ATAGAAGAGGCTATCAAGATCTTTTCCCGACCCAAAGTCTTTGTGAAGATGGATACCTAG


Translation (346 aa):
MCEGPSRISGPIPPDPTLCPDYYRRPASAQGRLEGNALKLDLLTSGRDLDSSPPRGPRIRPEAREILERG
Q
RGVGDVLLQLGCISLGSGVSPK
RKNPKDHEKENLRRIKEIQRRFQDQERSREQGQPKPLKALWRSPKYD
N
VESRVKARMK
ELGPTSVTEPAHFLRAHSRCGPGLPPSRASSPQLALPGPQAKGPGLGVDFISRNALAAK
R
APRRHSRSLQVLAQVQEQQRQAQERYNATQKGHVPH
YLLERRDLWRKEAEARQRSQPDPSMPPGHTLMP
E
NQRLETLNNLLQ
SQSQLLRELVLLPAGADSLRAQGHRAELDRKLVQIEEAIKIFSRPKVFVKMDT



Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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