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Report for CCDS53952.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53952.1 Public Homo sapiens 15 CORO2B 24 110 108 CCDS HistoryNCBI Gene:10391Re-query CCDS DB by CCDS ID:53952.1Re-query CCDS DB by GeneID:10391See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53952.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000543950.3 ENSP00000443819.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000543950.3Link to Ensembl Protein Viewer:ENSP00000443819.1Re-query CCDS DB by Nucleotide ID:ENST00000543950Re-query CCDS DB by Protein ID:ENSP00000443819
Original member Current member EBI ENST00000540068.6 ENSP00000446250.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000540068.6Link to Ensembl Protein Viewer:ENSP00000446250.1Re-query CCDS DB by Nucleotide ID:ENST00000540068Re-query CCDS DB by Protein ID:ENSP00000446250
Original member Current member NCBI NM_001190456.2 NP_001177385.1 Accepted alive Link to Nucleotide Sequence:NM_001190456.2Link to Protein Sequence:NP_001177385.1Re-query CCDS DB by Nucleotide ID:NM_001190456Re-query CCDS DB by Protein ID:NP_001177385Link to BLAST:NP_001177385.1
Original member Current member NCBI NM_001190457.2 NP_001177386.1 Accepted alive Link to Nucleotide Sequence:NM_001190457.2Link to Protein Sequence:NP_001177386.1Re-query CCDS DB by Nucleotide ID:NM_001190457Re-query CCDS DB by Protein ID:NP_001177386Link to BLAST:NP_001177386.1
Original member Current member NCBI NM_001324014.1 NP_001310943.1 Accepted alive Link to Nucleotide Sequence:NM_001324014.1Link to Protein Sequence:NP_001310943.1Re-query CCDS DB by Nucleotide ID:NM_001324014Re-query CCDS DB by Protein ID:NP_001310943Link to BLAST:NP_001310943.1
Original member Current member NCBI NM_001324015.1 NP_001310944.1 Accepted alive Link to Nucleotide Sequence:NM_001324015.1Link to Protein Sequence:NP_001310944.1Re-query CCDS DB by Nucleotide ID:NM_001324015Re-query CCDS DB by Protein ID:NP_001310944Link to BLAST:NP_001310944.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001177385.1 475 Q9UQ03-2 475 100% 0 0
NP_001177386.1 475 Q9UQ03-2 475 100% 0 0
NP_001310943.1 475 Q9UQ03-2 475 100% 0 0
NP_001310944.1 475 Q9UQ03-2 475 100% 0 0

Chromosomal Locations for CCDS 53952.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 68645160 68645360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68695140 68695256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68710732 68710881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68711542 68711706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68713925 68714041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68714559 68714663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68715215 68715311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68718698 68718810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68719144 68719234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68719413 68719552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68725843 68725974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1428 nt):
ATGTCCTGGCGTCCGCAATACCGTAGCTCCAAGTTCCGGAATGTCTACGGGAAGGTGGCCAACCGGGAGC
ACTGCTTCGATGGGATCCCCATCACCAAGAATGTGCACGACAACCACTTCTGTGCCGTCAACACCCGCTT
CCTGGCCATCGTCACCGAGAGCGCAGGGGGCGGCTCCTTCCTCGTCATCCCCCTGGAGCAGACAGGCAGG
ATTGAACCCAACTACCCCAAGGTCTGCGGCCACCAGGGCAATGTGCTGGATATCAAATGGAACCCCTTCA
TCGACAACATCATTGCCTCGTGCTCGGAGGACACGTCGGTGCGGATCTGGGAGATCCCCGAGGGCGGGCT
GAAGCGGAACATGACGGAGGCGCTCCTGGAGCTGCACGGGCACAGCCGGCGTGTGGGGCTGGTCGAGTGG
CACCCCACCACCAACAACATCCTGTTCAGCGCTGGCTACGACTACAAGGTCCTCATCTGGAACCTGGATG
TGGGTGAGCCGGTGAAGATGATTGACTGCCACACGGATGTGATCCTCTGCATGTCCTTCAACACGGACGG
CAGCCTGCTCACCACCACGTGCAAGGACAAGAAGCTGCGTGTGATTGAGCCCCGCTCTGGCCGTGTTCTG
CAGGAGGCCAACTGCAAAAACCACAGAGTGAACCGGGTGGTGTTCCTGGGGAACATGAAGCGGCTCCTCA
CGACAGGGGTCTCCAGGTGGAACACAAGACAGATTGCCCTCTGGGACCAGGAGGACCTCTCCATGCCCCT
GATCGAAGAGGAAATTGATGGGCTCTCTGGCCTCCTGTTCCCCTTCTATGATGCTGACACCCACATGCTC
TACCTGGCTGGAAAGGGTGATGGAAACATCCGGTACTACGAGATCAGCACTGAGAAGCCCTACCTGAGTT
ACCTCATGGAGTTCCGCTCCCCAGCCCCGCAGAAAGGCCTAGGGGTCATGCCCAAGCACGGGCTGGATGT
GTCAGCCTGCGAGGTGTTCCGCTTCTACAAGCTGGTGACTCTCAAGGGCCTGATCGAGCCCATCTCCATG
ATCGTGCCCCGGAGGTCAGATTCCTACCAGGAAGACATTTACCCAATGACACCAGGCACGGAGCCAGCAC
TGACCCCGGATGAATGGCTGGGAGGCATCAACCGAGATCCCGTGCTGATGTCTTTGAAAGAAGGCTATAA
GAAGTCCTCAAAAATGGTATTTAAGGCTCCCATCAAAGAAAAGAAGAGTGTTGTGGTCAACGGAATAGAT
TTATTAGAAAATGTCCCACCCAGGACAGAGAATGAGCTCCTTCGAATGTTCTTCCGGCAGCAGGATGAGA
TTCGACGGTTGAAAGAGGAGCTGGCCCAGAAGGACATCCGCATTCGGCAGCTCCAGCTGGAACTGAAAAA
CTTGCGCAACAGCCCCAAGAACTGTTAG

Translation (475 aa):
MSWRPQYRSSKFRNVYGKVANREHCFDGIPITKNVHDNHFCAVNTRFLAIVTESAGGGSFLVIPLEQTGR
IEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMTEALLELHGHSRRVGLVEW
HPTTNNILFSAGYDYKVLIWNLDVGEPVKMIDCHTDVILCMSFNTDGSLLTTTCKDKKLRVIEPRSGRVL
QEANCKNHRVNRVVFLGNMKRLLTTGVSRWNTRQIALWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHML
YLAGKGDGNIRYYEISTEKPYLSYLMEFRSPAPQKGLGVMPKHGLDVSACEVFRFYKLVTLKGLIEPISM
IVPRRSDSYQEDIYPMTPGTEPALTPDEWLGGINRDPVLMSLKEGYKKSSKMVFKAPIKEKKSVVVNGID
LLENVPPRTENELLRMFFRQQDEIRRLKEELAQKDIRIRQLQLELKNLRNSPKNC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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