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Report for CCDS8099.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8099.1 Public Homo sapiens 11 CDC42EP2 24 110 108 CCDS HistoryNCBI Gene:10435Re-query CCDS DB by CCDS ID:8099.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8099.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000279249.3 ENSP00000279249.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000279249.3Link to Ensembl Protein Viewer:ENSP00000279249.2Re-query CCDS DB by Nucleotide ID:ENST00000279249Re-query CCDS DB by Protein ID:ENSP00000279249
Original member Current member EBI ENST00000533419.1 ENSP00000431660.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000533419.1Link to Ensembl Protein Viewer:ENSP00000431660.1Re-query CCDS DB by Nucleotide ID:ENST00000533419Re-query CCDS DB by Protein ID:ENSP00000431660
Original member Current member NCBI NM_006779.4 NP_006770.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006779.4Link to Protein Sequence:NP_006770.1Re-query CCDS DB by Nucleotide ID:NM_006779Re-query CCDS DB by Protein ID:NP_006770Link to BLAST:NP_006770.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006770.1 210 O14613 210 100% 0 0

Chromosomal Locations for CCDS 8099.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 65320899 65321531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (633 nt):
ATGTCCACCAAGGTGCCCATCTATCTGAAGCGTGGCAGTCGCAAGGGCAAGAAGGAGAAGCTTCGGGACC
TGCTGTCCTCGGACATGATCAGCCCACCGCTGGGGGACTTCCGCCACACCATTCATATTGGCAGTGGCGG
CGGCAGTGACATGTTTGGCGACATCTCCTTCCTGCAGGGCAAGTTCCACCTCCTGCCGGGGACCATGGTG
GAGGGGCCTGAAGAAGATGGCACCTTCGACCTCCCCTTCCAGTTCACCCGCACCGCCACCGTGTGTGGGC
GGGAGCTCCCGGACGGCCCATCCCCTCTGCTCAAGAACGCCATCTCCCTCCCGGTTATCGGTGGACCCCA
GGCTCTCACCCTGCCCACAGCCCAGGCTCCACCCAAGCCCCCTCGCCTGCACCTGGAGACCCCTCAGCCT
TCCCCACAGGAGGGAGGGAGTGTGGACATCTGGAGGATTCCAGAGACTGGCTCCCCCAACAGTGGACTGA
CCCCGGAGTCAGGGGCCGAGGAGCCCTTCCTGTCCAATGCCAGCTCCCTGCTGTCCCTGCACGTGGACCT
GGGGCCTTCCATCCTGGATGATGTCCTGCAGATCATGGATCAGGACCTGGACAGCATGCAGATCCCCACA
TAG

Translation (210 aa):
MSTKVPIYLKRGSRKGKKEKLRDLLSSDMISPPLGDFRHTIHIGSGGGSDMFGDISFLQGKFHLLPGTMV
EGPEEDGTFDLPFQFTRTATVCGRELPDGPSPLLKNAISLPVIGGPQALTLPTAQAPPKPPRLHLETPQP
SPQEGGSVDIWRIPETGSPNSGLTPESGAEEPFLSNASSLLSLHVDLGPSILDDVLQIMDQDLDSMQIPT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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