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Report for CCDS25853.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25853.1 Public Mus musculus 12 Adi1 23 108 98 CCDS HistoryNCBI Gene:104923Re-query CCDS DB by CCDS ID:25853.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 25853.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020957.12 ENSMUSP00000020957.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020957.12Link to Ensembl Protein Viewer:ENSMUSP00000020957.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000020957Re-query CCDS DB by Protein ID:ENSMUSP00000020957
Original member Current member NCBI NM_134052.2 NP_598813.1 Accepted alive Link to Nucleotide Sequence:NM_134052.2Link to Protein Sequence:NP_598813.1Re-query CCDS DB by Nucleotide ID:NM_134052Re-query CCDS DB by Protein ID:NP_598813Link to BLAST:NP_598813.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598813.1 179 Q99JT9 179 100% 0 0

Chromosomal Locations for CCDS 25853.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 28675253 28675372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 28677778 28677897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 28679390 28679569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 28680966 28681085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (540 nt):
ATGGTGCAGGCCTGGTATATGGACGAGTCCACCGCCGACCCGCGGAAGCCCCACCGCGCACAGCCCGACC
GCCCCGTGAGCCTGGAGCAGCTGCGCACGCTCGGAGTGCTCTATTGGAAGCTAGATGCTGACAAGTATGA
GAACGATCCAGAACTGGAAAAGATCCGGAAAATGAGAAACTACTCCTGGATGGACATCATCACCATATGC
AAAGATACACTTCCCAATTACGAGGAGAAGATCAAGATGTTCTTTGAGGAACATCTGCATCTGGATGAGG
AGATCCGCTACATCCTGGAGGGTAGTGGGTACTTCGATGTCAGGGACAAGGAGGACAAGTGGATCCGGAT
TTCCATGGAGAAGGGGGACATGATTACTCTTCCTGCCGGCATCTATCACCGCTTCACACTGGACGAGAAG
AATTACGTGAAGGCCATGCGGCTGTTTGTTGGAGAACCTGTGTGGACACCATACAACCGGCCAGCTGACC
ATTTTGATGCCCGTGTACAGTACATGAGTTTTTTGGAAGGAACAGCATAG

Translation (179 aa):
MVQAWYMDESTADPRKPHRAQPDRPVSLEQLRTLGVLYWKLDADKYENDPELEKIRKMRNYSWMDIITIC
KDTLPNYEEKIKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEK
NYVKAMRLFVGEPVWTPYNRPADHFDARVQYMSFLEGTA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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