NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS46404.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46404.1 Public Homo sapiens 2 MAP3K2 24 110 108 CCDS HistoryNCBI Gene:10746Re-query CCDS DB by CCDS ID:46404.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46404.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000344908.9 ENSP00000343463.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000344908.9Link to Ensembl Protein Viewer:ENSP00000343463.5Re-query CCDS DB by Nucleotide ID:ENST00000344908Re-query CCDS DB by Protein ID:ENSP00000343463
Original member Current member EBI ENST00000409947.5 ENSP00000387246.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409947.5Link to Ensembl Protein Viewer:ENSP00000387246.1Re-query CCDS DB by Nucleotide ID:ENST00000409947Re-query CCDS DB by Protein ID:ENSP00000387246
Original member Current member EBI ENST00000682094.1 ENSP00000507315.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000682094.1Link to Ensembl Protein Viewer:ENSP00000507315.1Re-query CCDS DB by Nucleotide ID:ENST00000682094Re-query CCDS DB by Protein ID:ENSP00000507315
Original member Current member NCBI NM_001371910.2 NP_001358839.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001371910.2Link to Protein Sequence:NP_001358839.1Re-query CCDS DB by Nucleotide ID:NM_001371910Re-query CCDS DB by Protein ID:NP_001358839Link to BLAST:NP_001358839.1
Original member Current member NCBI NM_001371911.1 NP_001358840.1 Accepted alive Link to Nucleotide Sequence:NM_001371911.1Link to Protein Sequence:NP_001358840.1Re-query CCDS DB by Nucleotide ID:NM_001371911Re-query CCDS DB by Protein ID:NP_001358840Link to BLAST:NP_001358840.1
Original member Current member NCBI NM_006609.5 NP_006600.3 Accepted alive Link to Nucleotide Sequence:NM_006609.5Link to Protein Sequence:NP_006600.3Re-query CCDS DB by Nucleotide ID:NM_006609Re-query CCDS DB by Protein ID:NP_006600Link to BLAST:NP_006600.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001358839.1 619 Q9Y2U5 619 100% 0 0
NP_001358840.1 619 Q9Y2U5 619 100% 0 0
NP_006600.3 619 Q9Y2U5 619 100% 0 0

Chromosomal Locations for CCDS 46404.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 127307579 127307804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127308585 127308762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127314754 127314883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127317629 127317760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127318169 127318317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127322046 127322252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127323902 127323994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127324174 127324241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127325728 127325807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127326687 127326817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127329921 127330008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127330392 127330505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127335870 127335969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127337738 127337778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127338932 127339050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127343126 127343129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1860 nt):
ATGGATGATCAGCAAGCTTTGAACTCAATCATGCAAGATTTGGCTGTCCTTCATAAGGCCAGTCGACCAG
CATTATCCTTGCAGGAAACCAGAAAAGCAAAATCTTCATCACCAAAAAAACAGAATGATGTCCGAGTCAA
ATTTGAACATAGAGGAGAAAAAAGAATCCTTCAGTTCCCCAGACCAGTTAAACTGGAAGATCTGAGATCT
AAAGCTAAAATTGCCTTTGGACAGTCTATGGATCTACATTATACCAATAACGAGTTGGTAATTCCATTAA
CTACTCAAGATGACTTGGACAAAGCTGTGGAACTGCTGGATCGTAGTATTCATATGAAGAGCCTCAAGAT
ATTACTTGTAATAAATGGAAGTACACAGGCTACTAATTTAGAACCATTGCCATCACTAGAAGATTTGGAT
AATACAGTATTTGGAGCAGAGAGGAAAAAACGGCTATCTATAATAGGTCCTACTAGTAGAGATAGAAGTT
CTCCTCCCCCAGGTTACATTCCAGATGAATTACACCAGGTTGCCCGGAATGGGTCATTCACTAGTATCAA
CAGTGAAGGAGAGTTCATTCCAGAGAGCATGGACCAAATGCTGGATCCATTATCTTTAAGCAGCCCTGAA
AATTCTGGCTCAGGAAGTTGTCCATCACTTGATAGTCCTTTGGATGGAGAGAGCTATCCAAAATCACGAA
TGCCTAGGGCTCAGAGCTACCCAGATAATCATCAGGAATTTTCAGACTATGATAACCCTATCTTTGAGAA
ATTTGGAAAAGGAGGAACATATCCAAGAAGGTATCATGTTTCATATCATCATCAAGAGTATAATGATGGT
CGTAAAACTTTTCCAAGAGCTAGAAGGACCCAGGGGACCAGCTTACGGTCTCCTGTGAGTTTCAGTCCTA
CTGATCATTCCTTAAGCACTAGTAGTGGAAGCAGTATCTTTACCCCAGAGTATGATGATAGTCGAATAAG
AAGAAGGGGAAGTGACATAGACAATCCTACTTTGACCGTAATGGACATCAGCCCACCCAGCCGTTCACCT
CGAGCTCCGACCAACTGGAGATTGGGCAAACTGCTTGGCCAAGGAGCCTTTGGAAGGGTCTACCTCTGTT
ATGATGTTGATACAGGAAGAGAATTGGCTGTTAAGCAAGTTCAATTTGACCCCGATAGTCCTGAGACCAG
CAAGGAAGTAAATGCACTTGAGTGTGAAATTCAGTTGCTGAAAAACTTGCTACATGAGCGAATTGTTCAG
TATTATGGCTGTTTGAGGGATCCCCAGGAAAAAACACTTTCCATATTTATGGAATATATGCCAGGGGGTT
CAATTAAGGACCAATTAAAAGCATATGGCGCTCTTACTGAGAATGTGACTAGGAAATACACCCGTCAGAT
TCTGGAGGGTGTCCATTATTTGCACAGTAATATGATTGTCCATAGAGATATCAAAGGCGCAAATATCCTG
CGAGATTCAACAGGCAACGTCAAACTAGGAGATTTTGGGGCCAGCAAACGGCTTCAGACCATCTGTCTCT
CAGGGACAGGAATGAAGTCTGTCACGGGCACACCATACTGGATGAGCCCTGAAGTCATCAGTGGAGAAGG
CTATGGAAGAAAAGCAGACATCTGGAGTGTTGCATGTACTGTGGTAGAAATGCTAACTGAAAAGCCGCCT
TGGGCTGAATTTGAAGCAATGGCTGCCATCTTTAAAATCGCCACTCAGCCAACAAACCCAAAGCTGCCAC
CTCATGTCTCAGACTATACTCGAGATTTCCTCAAACGGATTTTTGTAGAGGCCAAACTGAGACCTTCAGC
TGATGAACTCTTAAGGCACATGTTTGTGCATTATCACTAG

Translation (619 aa):
MDDQQALNSIMQDLAVLHKASRPALSLQETRKAKSSSPKKQNDVRVKFEHRGEKRILQFPRPVKLEDLRS
KAKIAFGQSMDLHYTNNELVIPLTTQDDLDKAVELLDRSIHMKSLKILLVINGSTQATNLEPLPSLEDLD
NTVFGAERKKRLSIIGPTSRDRSSPPPGYIPDELHQVARNGSFTSINSEGEFIPESMDQMLDPLSLSSPE
NSGSGSCPSLDSPLDGESYPKSRMPRAQSYPDNHQEFSDYDNPIFEKFGKGGTYPRRYHVSYHHQEYNDG
RKTFPRARRTQGTSLRSPVSFSPTDHSLSTSSGSSIFTPEYDDSRIRRRGSDIDNPTLTVMDISPPSRSP
RAPTNWRLGKLLGQGAFGRVYLCYDVDTGRELAVKQVQFDPDSPETSKEVNALECEIQLLKNLLHERIVQ
YYGCLRDPQEKTLSIFMEYMPGGSIKDQLKAYGALTENVTRKYTRQILEGVHYLHSNMIVHRDIKGANIL
RDSTGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVACTVVEMLTEKPP
WAEFEAMAAIFKIATQPTNPKLPPHVSDYTRDFLKRIFVEAKLRPSADELLRHMFVHYH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH