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Report for CCDS29771.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29771.1 Public Mus musculus 19 Ankrd1 23 108 98 CCDS HistoryNCBI Gene:107765Re-query CCDS DB by CCDS ID:29771.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29771.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000237142.1 ENSMUSP00000157960.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000237142.1Link to Ensembl Protein Viewer:ENSMUSP00000157960.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000237142Re-query CCDS DB by Protein ID:ENSMUSP00000157960
Original member Current member NCBI NM_013468.3 NP_038496.2 Accepted alive Link to Nucleotide Sequence:NM_013468.3Link to Protein Sequence:NP_038496.2Re-query CCDS DB by Nucleotide ID:NM_013468Re-query CCDS DB by Protein ID:NP_038496Link to BLAST:NP_038496.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_038496.2 319 Q9CR42 319 100% 0 0

Chromosomal Locations for CCDS 29771.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 36112707 36112817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36114977 36115075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36115199 36115297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36115473 36115571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36116771 36116869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36117834 36117941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36118226 36118363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36119219 36119398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36119755 36119781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (960 nt):
ATGATGGTACTGAGAGTAGAGGAGCTGGTAACAGGCAAAAAGAACAGCAATGGGGCCGCAGGGGAATTCC
TTCCTGGGGAGTTCAGAAATGGAGAATATGAAGCTGCTGTTGCTTTGGAGAAGCAAGAGGACCTGAAGAC
ACTTCCGGCCAACAGCGTGAAGCAGGGGGAGGAACAACGGAAAAGCGAGAAACTGCGAGAGGCAGAGCTC
AAAAAGAAAAAACTAGAACAAAGATCAAAGCTTGAAAACTTAGAAGACCTTGAAATAATTGTTCAACTGA
AGAAAAGGAAAAAATACAAGAAAACCAAAGTTCCAGTTGTGAAGGAGCCAGAACCTGAAATTATGACTGA
ACCTGTGGATGTGCCGAGGTTTCTGAAAGCTGCGCTGGAGAACAAACTGCCAGTTGTAGAGAAATTCCTG
TCAGACAAGAACAGCCCCGACGTCTGCGATGAGTATAAACGGACGGCACTCCACCGAGCATGCTTAGAAG
GACACTTGGCGATCGTGGAGAAGTTAATGGAGGCTGGAGCCCAGATTGAATTCCGAGATATGCTTGAATC
CACAGCCATCCACTGGGCATGTCGTGGAGGAAACGCAGATGTCCTGAAACTGTTGCTGAACAAAGGAGCC
AAAATCAGTGCCAGAGACAAGCTTCTCAGCACAGCGCTGCATGTGGCGGTGAGGACTGGTCATTACGAGT
GCGCTGAGCACCTCATCGCCTGCGAGGCTGATCTCAATGCCAAGGACAGAGAAGGAGACACCCCACTGCA
TGATGCTGTGAGGCTGAACCGCTATAAGATGATTCGACTCTTGATGACCTTCGGTGCGGACCTCAAGGTC
AAGAACTGTGCTGGGAAGACCCCCATGGATCTGGTGTTGCACTGGCAGAGTGGAACCAAAGCAATATTCG
ACAGCCTCAAGGAGAATGCCTACAAGAACTCTCGCATAGCTACATTCTGA

Translation (319 aa):
MMVLRVEELVTGKKNSNGAAGEFLPGEFRNGEYEAAVALEKQEDLKTLPANSVKQGEEQRKSEKLREAEL
KKKKLEQRSKLENLEDLEIIVQLKKRKKYKKTKVPVVKEPEPEIMTEPVDVPRFLKAALENKLPVVEKFL
SDKNSPDVCDEYKRTALHRACLEGHLAIVEKLMEAGAQIEFRDMLESTAIHWACRGGNADVLKLLLNKGA
KISARDKLLSTALHVAVRTGHYECAEHLIACEADLNAKDREGDTPLHDAVRLNRYKMIRLLMTFGADLKV
KNCAGKTPMDLVLHWQSGTKAIFDSLKENAYKNSRIATF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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