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Report for CCDS56248.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56248.1 Public Homo sapiens 3 ANO10 24 110 108 CCDS HistoryNCBI Gene:55129Re-query CCDS DB by CCDS ID:56248.1Re-query CCDS DB by GeneID:55129See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56248.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396091.7 ENSP00000379398.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396091.7Link to Ensembl Protein Viewer:ENSP00000379398.3Re-query CCDS DB by Nucleotide ID:ENST00000396091Re-query CCDS DB by Protein ID:ENSP00000379398
Original member Current member NCBI NM_001204832.3 NP_001191761.1 Accepted alive Link to Nucleotide Sequence:NM_001204832.3Link to Protein Sequence:NP_001191761.1Re-query CCDS DB by Nucleotide ID:NM_001204832Re-query CCDS DB by Protein ID:NP_001191761Link to BLAST:NP_001191761.1
Original member Current member NCBI NM_001346466.2 NP_001333395.1 Accepted alive Link to Nucleotide Sequence:NM_001346466.2Link to Protein Sequence:NP_001333395.1Re-query CCDS DB by Nucleotide ID:NM_001346466Re-query CCDS DB by Protein ID:NP_001333395Link to BLAST:NP_001333395.1
Original member Current member NCBI NM_001346469.2 NP_001333398.1 Accepted alive Link to Nucleotide Sequence:NM_001346469.2Link to Protein Sequence:NP_001333398.1Re-query CCDS DB by Nucleotide ID:NM_001346469Re-query CCDS DB by Protein ID:NP_001333398Link to BLAST:NP_001333398.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001191761.1 594 Q9NW15-3 594 100% 0 0
NP_001333395.1 594 Q9NW15-3 594 100% 0 0
NP_001333398.1 594 Q9NW15-3 594 100% 0 0

Chromosomal Locations for CCDS 56248.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 43366906 43366974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43432611 43432727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43549720 43549848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43555278 43555469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43561220 43561402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43565653 43565727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43574809 43574864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43576692 43577261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43580353 43580472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43598532 43598666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43605714 43605852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1785 nt):
ATGAAAGTGACCTTATCAGCTTTGGATACTTCTGAGAGTTCTTTCACACCTTTGGTGGTCATAGAACTTG
CTCAGGATGTCAAAGAAGAAACCAAAGAATGGCTGAAAAACAGAATTATAGCTAAAAAAAAAGATGGAGA
TAACAATGATGATTTCCTGACAATGGCAGAATGTCAATTCATTATCAAACATGAACTTGAAAATCTTAGA
GCTAAAGATGAAAAAATGATCCCTGGTTACCCTCAGGCAAAGTTGTATCCAGGAAAATCATTGTTGAGAA
GATTGCTCACGTCTGGCATCGTGATTCAGGTGTTTCCACTGCATGACAGTGAAGCCCTGAAGAAGCTTGA
GGACACCTGGTACACTCGGTTTGCTTTGAAGTATCAGCCCATAGACAGTATTCGTGGCTACTTTGGGGAA
ACAATTGCTCTGTACTTTGGATTTTTGGAGTATTTCACTTTTGCATTAATCCCCATGGCTGTCATTGGGT
TACCTTACTACTTGTTTGTGTGGGAAGACTATGACAAGTACGTGATCTTTGCCTCGTTCAACCTCATCTG
GTCCACGGTGATTCTGGAACTGTGGAAGCGTGGCTGTGCCAACATGACCTACAGGTGGGGGACACTGCTC
ATGAAGAGAAAGTTTGAGGAGCCCCGGCCAGGATTTCATGGTGTCTTGGGTATCAATTCCATCACTGGGA
AGGAGGAGCCTCTGTACCCCAGCTACAAGAGACAGTTGCGCATTTACCTGGTCTCCCTGCCATTCGTGTG
CCTCTGCCTCTATTTCTCACTGTATGTCATGATGATTTACTTCGACATGGAGGTTTGGGCCTTGGGTCTA
CATGAGAACAGCGGGTCTGAGTGGACCAGTGTCCTGTTGTATGTGCCCAGCATCATCTATGCCATTGTGA
TTGAGATCATGAATCGTCTCTATCGATATGCTGCCGAGTTTTTAACTTCATGGGAGAATCACAGATTGGA
ATCTGCCTATCAGAACCATCTAATTCTGAAAGTTTTAGTGTTCAACTTCCTCAATTGCTTTGCCTCACTC
TTCTATATTGCCTTTGTCTTGAAAGATATGAAGCTTTTGCGCCAGAGCTTGGCCACTCTCCTAATTACCT
CCCAGATCCTCAACCAAATTATGGAATCTTTTCTTCCTTATTGGCTCCAAAGGAAGCATGGTGTGCGGGT
GAAGAGGAAGGTGCAGGCTTTAAAGGCAGACATTGATGCTACATTATATGAACAAGTCATCCTGGAAAAA
GAAATGGGAACTTATTTGGGCACCTTTGATGATTACTTGGAGTTATTCCTGCAGTTTGGTTATGTGAGCC
TTTTCTCCTGTGTTTACCCATTAGCAGCTGCCTTTGCTGTGTTAAATAACTTCACTGAAGTAAATTCAGA
TGCCTTAAAAATGTGCAGGGTCTTCAAACGTCCATTCTCAGAACCTTCAGCCAATATTGGTGTGTGGCAG
TTGGCTTTTGAAACGATGAGTGTTATATCTGTGGTCACTAACTGTGCGCTGATTGGAATGTCACCACAAG
TGAATGCAGTCTTTCCAGAATCAAAAGCAGACCTCATTTTGATTGTAGTAGCAGTGGAGCACGCACTCCT
GGCTTTAAAGTTTATACTTGCATTTGCCATACCTGATAAGCCACGGCATATCCAGATGAAACTAGCCAGA
CTGGAATTTGAGTCTTTGGAGGCACTCAAGCAGCAGCAAATGAAGCTCGTGACCGAGAACCTGAAGGAGG
AACCAATGGAAAGCGGGAAGGAGAAGGCAACCTGA

Translation (594 aa):
MKVTLSALDTSESSFTPLVVIELAQDVKEETKEWLKNRIIAKKKDGDNNDDFLTMAECQFIIKHELENLR
AKDEKMIPGYPQAKLYPGKSLLRRLLTSGIVIQVFPLHDSEALKKLEDTWYTRFALKYQPIDSIRGYFGE
TIALYFGFLEYFTFALIPMAVIGLPYYLFVWEDYDKYVIFASFNLIWSTVILELWKRGCANMTYRWGTLL
MKRKFEEPRPGFHGVLGINSITGKEEPLYPSYKRQLRIYLVSLPFVCLCLYFSLYVMMIYFDMEVWALGL
HENSGSEWTSVLLYVPSIIYAIVIEIMNRLYRYAAEFLTSWENHRLESAYQNHLILKVLVFNFLNCFASL
FYIAFVLKDMKLLRQSLATLLITSQILNQIMESFLPYWLQRKHGVRVKRKVQALKADIDATLYEQVILEK
EMGTYLGTFDDYLELFLQFGYVSLFSCVYPLAAAFAVLNNFTEVNSDALKMCRVFKRPFSEPSANIGVWQ
LAFETMSVISVVTNCALIGMSPQVNAVFPESKADLILIVVAVEHALLALKFILAFAIPDKPRHIQMKLAR
LEFESLEALKQQQMKLVTENLKEEPMESGKEKAT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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