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Report for CCDS85677.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85677.1 Public Mus musculus 9 Ube2q2 23 108 98 CCDS HistoryNCBI Gene:109161Re-query CCDS DB by CCDS ID:85677.1Re-query CCDS DB by GeneID:109161See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85677.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000121677.7 ENSMUSP00000113336.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000121677.7Link to Ensembl Protein Viewer:ENSMUSP00000113336.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000121677Re-query CCDS DB by Protein ID:ENSMUSP00000113336
Original member Current member NCBI NM_001346657.1 NP_001333586.1 Accepted alive Link to Nucleotide Sequence:NM_001346657.1Link to Protein Sequence:NP_001333586.1Re-query CCDS DB by Nucleotide ID:NM_001346657Re-query CCDS DB by Protein ID:NP_001333586Link to BLAST:NP_001333586.1

Chromosomal Locations for CCDS 85677.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 55149635 55149826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55162968 55163069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55176191 55176247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55180473 55180613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55183102 55183186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55184904 55184964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55185670 55185760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55191842 55191900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55194987 55195035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55195424 55195519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55203701 55203767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 55205960 55205991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1032 nt):
ATGTCCGTGTCAGGGCTCAAGGCCGAGCTGAAGTTCCTGGCGTCCATCTTCGACAAGAACCACGAGCGAT
TCCGCATCGTCAGCTGGAAGCTGGACGAGCTGCACTGCCAGTTCCTGGTGCCGCCGCCGCCACCACCGCC
GGGCAGCTCGCTTTCGCCGCCGCCGCCGCTCACACTTCACTGCAACATCACGGAATCTTACCCATCTTCT
TCACCAATATGGTTTGTGGACTCTGATGACCCAAATCTGACATCAGTTCTGGAACGCTTAGAAGATACTA
AGAACAACAGTTCGAATGGGACAACTGAAGAAGTAACTTCAGAAGAAGAGGAAGAGGAGGAGATGGCTGA
AGATATAGAAGACTTGGATCACTATGAGATGAAGGAAGAAGAACCTATTAATGGGAAAAAGTCAGAGGAT
GAAGGGATTGAAAAAGAAAATTTGGCAATATTAGAGAAAATCAGGAAGACTCAAAGGCAAGACCATTTAA
ATGGTGCAGTGTCTGGGTCAGTACAAGCATCAGACAGACTGATGAAGGAGCTCAGGGACGTCTACAGATC
ACAGAGCTACAAGGCAGGGATTTATTCAGTGGAGCTAATAAATGACAGCTTATATGACTGGCATGTCAAA
CTACACAAGGTTGACTCTGATAGTCCTTTGCACAGTGATCTTCAGATCTTAAAAGAAAAAGAAGGCATAG
AATATATTTTGCTTAACTTCTCTTTTAAGGATAATTTTCCATTTGATCCTCCGTTTGTTAGAGTGGTGTT
ACCTGTTCTCTCAGGAGGGTATGTGTTGGGTGGAGGAGCACTTTGTATGGAACTTCTCACAAAACAGGGC
TGGAGCAGTGCCTACTCAATAGAATCTGTCATCATGCAGATCAATGCCACCTTAGTGAAAGGCAAAGCCC
GGGTGCAGTTTGGAGCAAATAAGAATCAGTATAATCTAGCACGAGCCCAACAGTCCTATAATTCCATTGT
ACAGATACATGAGAAAAATGGCTGGTACACACCTCCAAAGGAAGATGGCTAA

Translation (343 aa):
MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPPPPPPPGSSLSPPPPLTLHCNITESYPSS
SPIWFVDSDDPNLTSVLERLEDTKNNSSNGTTEEVTSEEEEEEEMAEDIEDLDHYEMKEEEPINGKKSED
EGIEKENLAILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDVYRSQSYKAGIYSVELINDSLYDWHVK
LHKVDSDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGGGALCMELLTKQG
WSSAYSIESVIMQINATLVKGKARVQFGANKNQYNLARAQQSYNSIVQIHEKNGWYTPPKEDG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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