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Report for CCDS84375.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84375.1 Public Mus musculus 18 Igip 23 108 98 CCDS HistoryNCBI Gene:109169Re-query CCDS DB by CCDS ID:84375.1See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84375.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000210490.2 ENSMUSP00000147405.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000210490.2Link to Ensembl Protein Viewer:ENSMUSP00000147405.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000210490Re-query CCDS DB by Protein ID:ENSMUSP00000147405
Original member Current member NCBI NM_001267796.1 NP_001254725.1 Accepted alive Link to Nucleotide Sequence:NM_001267796.1Link to Protein Sequence:NP_001254725.1Re-query CCDS DB by Nucleotide ID:NM_001267796Re-query CCDS DB by Protein ID:NP_001254725Link to BLAST:NP_001254725.1

Chromosomal Locations for CCDS 84375.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 36301183 36301344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (162 nt):
ATGTGCAGTTATTATCATATGAAGAAGCGCAGTGTGTTGGGCTGTAATATAACCATATTTGCTGTCATGT
TCTCCCATCTCAGTGCTGGGAACTCACCATGTGGAAACCAAGCAACCGTGTTGTGCATCAGCCGGCTTGA
GTTTGTTCAATATCAAAGCTGA

Translation (53 aa):
MCSYYHMKKRSVLGCNITIFAVMFSHLSAGNSPCGNQATVLCISRLEFVQYQS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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