NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS27252.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27252.1 Public Mus musculus 14 Piwil2 23 108 98 CCDS HistoryNCBI Gene:57746Re-query CCDS DB by CCDS ID:27252.1Re-query CCDS DB by GeneID:57746See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27252.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000048129.5 ENSMUSP00000047385.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000048129.5Link to Ensembl Protein Viewer:ENSMUSP00000047385.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000048129Re-query CCDS DB by Protein ID:ENSMUSP00000047385
Original member Current member NCBI NM_021308.2 NP_067283.1 Accepted alive Link to Nucleotide Sequence:NM_021308.2Link to Protein Sequence:NP_067283.1Re-query CCDS DB by Nucleotide ID:NM_021308Re-query CCDS DB by Protein ID:NP_067283Link to BLAST:NP_067283.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067283.1 971 Q8CDG1 971 100% 0 0

Chromosomal Locations for CCDS 27252.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 70374280 70374436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70375939 70376046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70376663 70376916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70389892 70389997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70390528 70390616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70391364 70391480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70392479 70392580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70394011 70394199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70395328 70395441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70398144 70398284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70399735 70399824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70401418 70401502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70402034 70402222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70408911 70409024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70409305 70409385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70410382 70410506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70411134 70411251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70420640 70420750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70421449 70421655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70422628 70422766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70422895 70422982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70426507 70426698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2916 nt):
ATGGATCCTGTCAGGCCGTTGTTCAGGGGGCCCACCCCAGTCCACCCATCTCAGTGTGTGCGGATGCCAG
GCTGTTGGCCTCAAGCTCCTAGACCTTTGGAACCAGCTTGGGGTAGGGCAGGACCTGCAGGCAGAGGCCT
TGTGTTTAGAAAACCAGAAGACTCCAGCCCACCACTCCAGCCAGTACAAAAGGATTCTGTAGGTTTGGTG
TCCATGTTCCGTGGCATGGGTCTTGACACAGCATTCCGGCCTCCTTCAAAACGAGAAGTGCCTCCTTTAG
GCAGAGGAGTTCTAGGTCGAGGCTTGTCTGCTAACATGGTCCGCAAGGACAGAGAAGAACCCCGTTCCTC
TTTGCCTGATCCTTCGGTGCTGGCAGCTGGGGACAGCAAACTGGCAGAGGCTTCTGTTGGTTGGAGTAGA
ATGCTGGGAAGAGGTAGTTCTGAGGTCTCTCTGTTACCACTGGGACGAGCAGCCAGTAGTATAGGCAGAG
GAATGGACAAACCTCCCAGTGCCTTTGGCCTCACAGCTCGGGATCCCCCACGGCTGCCACAGCCTCCAGC
TCTGTCTCCAACTTCACTGCACTCTGCCGATCCCCCTCCGGTCCTGACTATGGAACGAAAGGAAAAAGAG
CTTTTGGTCAAGCAAGGATCAAAAGGAACTCCTCAGTCTTTGGGACTGAACCTCATCAAAATCCAGTGTC
ATAACGAAGCAGTTTATCAGTACCATGTGACTTTCAGCCCCAGTGTGGAATGCAAAAGCATGAGGTTTGG
CATGTTGAAGGACCACCAGTCTGTCACTGGAAACGTCACTGCTTTTGATGGCTCTATTCTTTATCTTCCT
GTTAAGCTTCAACAAGTTGTTGAGTTAAAAAGTCAGAGGAAAACTGACGATGCCGAGATCAGTATCAAGA
TTCAGCTGACAAAGATCCTGGAGCCGTGTTCTGACCTGTGCATCCCCTTCTACAATGTTGTCTTCCGGCG
GGTAATGAAACTTCTGGATATGAAGCTTGTGGGGAGAAACTTCTATGACCCTACAAGTGCCATGGTACTG
CAGCAACACAGATTGCAGATCTGGCCTGGCTATGCGGCTAGTATCCGGAGGACAGACGGGGGTCTCTTCC
TGCTCGCTGATGTCTCTCATAAGGTCATTCGGAACGACTCTGTGCTGGATGTCATGCATGCTATCTACCA
GCAGAACAAGGAGCACTTCCAGGACGAGTGCAGCAAGCTTCTGGTTGGCAGCATTGTCATCACGCGCTAC
AACAATCGTACCTACCGAATCGATGATGTGGACTGGAACAAGACCCCTAAAGACAGCTTTGTCATGTCGG
ACGGGAAGGAAATCACATTCCTGGAATACTACAGCAAAAACTATGGGATCACAGTCAAGGAAGATGACCA
GCCGCTGCTGATCCACCGGCCCAGTGAGAGACAGAATAACCATGGCATGTTGCTGAAGGGCGAGATCCTG
CTGCTGCCCGAGCTCTCCTTCATGACGGGGATCCCTGAGAAGATGAAGAAGGACTTCAGGGCCATGAAGG
ACTTGACTCAGCAGATTAACCTGAGCCCCAAGCAGCACCACGGTGCTTTGGAATGCCTGCTGCAGAGAAT
TTCACAAAACGAGACAGCCAGCAATGAGCTGACCCGCTGGGGGCTCAGTCTGCATAAAGATGTCCACAAG
ATTGAAGGTCGGCTTCTGCCAATGGAGAGGATCAACTTAAGGAACACTTCATTTGTCACATCGGAGGACC
TGAACTGGGTTAAGGAAGTGACCAGAGATGCTTCCATTCTAACTATTCCCATGCATTTCTGGGCACTCTT
TTATCCAAAGAGAGCAATGGACCAAGCCAGAGAACTGGTTAACATGTTGGAAAAGATTGCCGGGCCCATT
GGCATGCGCATAAGCCCCCCAGCCTGGGTTGAGCTGAAGGATGACCGAATAGAGACCTATATCAGGACCA
TTCAGTCCTTACTGGGAGTTGAGGGGAAGATACAAATGGTCGTTTGCATCATCATGGGCACACGTGATGA
TCTCTATGGAGCCATCAAGAAGCTGTGCTGCGTGCAGTCCCCAGTGCCCTCACAGGTCATCAATGTCCGA
ACCATTGGTCAGCCCACCAGGCTTCGGAGCGTGGCTCAGAAAATTTTACTTCAGATGAACTGTAAACTGG
GTGGTGAGCTCTGGGGAGTGGATATTCCGCTGAAACAACTAATGGTGATTGGAATGGATGTGTACCATGA
CCCCAGCAGAGGCATGCGCTCTGTGGTCGGCTTCGTGGCCAGCATAAATCTCACACTCACCAAATGGTAC
TCGAGGGTGGTGTTCCAGATGCCACATCAGGAGATTGTGGACAGCCTGAAGCTCTGCCTGGTGGGTTCCT
TGAAAAAGTATTATGAGGTGAACCATTGTCTCCCAGAGAAAATTGTGGTGTACCGAGATGGAGTGTCTGA
TGGCCAGCTAAAGACAGTTGCCAACTACGAGATCCCTCAGCTGCAGAAGTGTTTTGAAGCCTTTGATAAC
TACCACCCCAAGATGGTGGTGTTTGTAGTTCAGAAGAAAATCAGCACCAATCTGTACCTTGCTGCTCCTG
ATCACTTCGTAACCCCCTCCCCCGGGACTGTGGTTGATCATACCATAACCAGCTGTGAGTGGGTGGATTT
CTACCTTCTTGCCCATCATGTGCGACAGGGCTGTGGCATACCTACACACTACATCTGTGTTCTGAACACT
GCAAATCTGAGCCCTGATCACATGCAGAGGTTGACTTTCAAACTATGCCACATGTACTGGAATTGGCCTG
GTACCATCCGAGTTCCAGCTCCTTGCAAGTATGCCCACAAGCTAGCTTTCCTGTCCGGACAGATTTTGCA
TCATGAGCCAGCCATCCAGCTGTGTGGGAACCTGTTCTTCCTGTAA

Translation (971 aa):
MDPVRPLFRGPTPVHPSQCVRMPGCWPQAPRPLEPAWGRAGPAGRGLVFRKPEDSSPPLQPVQKDSVGLV
SMFRGMGLDTAFRPPSKREVPPLGRGVLGRGLSANMVRKDREEPRSSLPDPSVLAAGDSKLAEASVGWSR
MLGRGSSEVSLLPLGRAASSIGRGMDKPPSAFGLTARDPPRLPQPPALSPTSLHSADPPPVLTMERKEKE
LLVKQGSKGTPQSLGLNLIKIQCHNEAVYQYHVTFSPSVECKSMRFGMLKDHQSVTGNVTAFDGSILYLP
VKLQQVVELKSQRKTDDAEISIKIQLTKILEPCSDLCIPFYNVVFRRVMKLLDMKLVGRNFYDPTSAMVL
QQHRLQIWPGYAASIRRTDGGLFLLADVSHKVIRNDSVLDVMHAIYQQNKEHFQDECSKLLVGSIVITRY
NNRTYRIDDVDWNKTPKDSFVMSDGKEITFLEYYSKNYGITVKEDDQPLLIHRPSERQNNHGMLLKGEIL
LLPELSFMTGIPEKMKKDFRAMKDLTQQINLSPKQHHGALECLLQRISQNETASNELTRWGLSLHKDVHK
IEGRLLPMERINLRNTSFVTSEDLNWVKEVTRDASILTIPMHFWALFYPKRAMDQARELVNMLEKIAGPI
GMRISPPAWVELKDDRIETYIRTIQSLLGVEGKIQMVVCIIMGTRDDLYGAIKKLCCVQSPVPSQVINVR
TIGQPTRLRSVAQKILLQMNCKLGGELWGVDIPLKQLMVIGMDVYHDPSRGMRSVVGFVASINLTLTKWY
SRVVFQMPHQEIVDSLKLCLVGSLKKYYEVNHCLPEKIVVYRDGVSDGQLKTVANYEIPQLQKCFEAFDN
YHPKMVVFVVQKKISTNLYLAAPDHFVTPSPGTVVDHTITSCEWVDFYLLAHHVRQGCGIPTHYICVLNT
ANLSPDHMQRLTFKLCHMYWNWPGTIRVPAPCKYAHKLAFLSGQILHHEPAIQLCGNLFFL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH