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Report for CCDS23477.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23477.1 Public Mus musculus 9 Acy1 23 108 98 CCDS HistoryNCBI Gene:109652Re-query CCDS DB by CCDS ID:23477.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23477.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000024031.12 ENSMUSP00000024031.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000024031.12Link to Ensembl Protein Viewer:ENSMUSP00000024031.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000024031Re-query CCDS DB by Protein ID:ENSMUSP00000024031
Original member Current member NCBI NM_001276442.1 NP_001263371.1 Accepted alive Link to Nucleotide Sequence:NM_001276442.1Link to Protein Sequence:NP_001263371.1Re-query CCDS DB by Nucleotide ID:NM_001276442Re-query CCDS DB by Protein ID:NP_001263371Link to BLAST:NP_001263371.1
Original member Current member NCBI NM_025371.3 NP_079647.1 Accepted alive Link to Nucleotide Sequence:NM_025371.3Link to Protein Sequence:NP_079647.1Re-query CCDS DB by Nucleotide ID:NM_025371Re-query CCDS DB by Protein ID:NP_079647Link to BLAST:NP_079647.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001263371.1 408 Q99JW2 408 99.0196% 0 4
NP_079647.1 408 Q99JW2 408 99.0196% 0 4

Chromosomal Locations for CCDS 23477.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 106433081 106433245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 106433362 106433422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 106433567 106433646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 106434530 106434598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 106434685 106434829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 106434965 106435014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 106435096 106435169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 106435468 106435524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 106435615 106435704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 106435784 106435860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 106436126 106436220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 106436696 106436800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 106436889 106436953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 106437629 106437722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1227 nt):
ATGACCACCAAGGATCCCGAGTCTGAGCACCCCTCCGTGACGCTCTTCCGCCAGTACCTGCGCATCTGCA
CTGTGCAACCCAATCCAGACTATGGAGGGGCCATCACCTTCCTGGAGGAGAGAGCCCGCCAGCTGGGTCT
GAGCTGTCAGAAAATAGAGGTGGTGCCTGGCTTTGTGATCACTGTGCTGACCTGGCCAGGCACCAACCCG
TCACTCCCCTCCATCTTGCTAAACTCCCACACAGATGTGGTACCTGTCTTCAAGGAACATTGGCATCACG
ACCCCTTTGAGGCCTTCAAGGATTCCGAGGGCTACATCTATGCTAGGGGCTCCCAGGACATGAAGAGTGT
CAGCATCCAGTACCTGGAAGCTGTGAGGAGGCTGAAGAGCGAGGGCCACCGATTCCCTAGGACCATCCAC
ATGACCTTTGTGCCTGACGAGGAGGTCGGAGGTCACAAGGGGATGGAGTTGTTTGTGAAGAGGCCTGAGT
TCCAGGCTCTGCGGGCAGGCTTCGTTCTGGACGAGGGCCTGGCCAACCCCACGGATGCCTTTACTGTCTT
TTATAGTGAGCGGAGTCCTTGGTGGGTACAGGTTACCAGCACTGGGAAGCCAGGCCATGCCTCACGCTTC
ATTGAGGATACAGCTGCAGAGAAGTTGCATAAGGTTATAAGCTCCATCTTGGCATTCCGGGAGAAGGAAA
GGCAGAGGCTGCAGGCGAACCCTCACCTGAAGGAAGGCGCCGTGACTTCGGTGAATCTGACCAAGCTTGA
AGGTGGCGTGGCCTATAATGTGGTACCTGCCACTATGAGTGCCAGCTTTGACTTCCGAGTGGCACCAGAT
GTAGACATGAAGGCCTTCGAGAAGCAGCTGCAGAGATGGTGCCAGGAAGCAGGAGAGGGGGTCACCTTTG
AGTTTGCTCAGAAGTTTACAGAGCCTCGAATGACACCCACGGATGATTCAGATCCCTGGTGGGCAGCTTT
CAGCGGAGCCTGCAAGGCAATGAACCTCACTCTGGAGCCAGAGATCTTTCCTGCTGCCACTGACAGCCGC
TTTATCCGGGCGGTGGGGATCCCAGCTCTGGGCTTCTCGCCCATGAACCGCACACCTGTCCTGCTACATG
ACCATAATGAACGGCTGCATGAGGATATATTTCTCCGTGGGGTTGACATATATACAGGCCTCCTCTCTGC
ACTTGCTAGTGTGCCCACCCTGCCTAGTGAAAGCTGA

Translation (408 aa):
MTTKDPESEHPSVTLFRQYLRICTVQPNPDYGGAITFLEERARQLGLSCQKIEVVPGFVITVLTWPGTNP
SLPSILLNSHTDVVPVFKEHWHHDPFEAFKDSEGYIYARGSQDMKSVSIQYLEAVRRLKSEGHRFPRTIH
MTFVPDEEVGGHKGMELFVKRPEFQALRAGFVLDEGLANPTDAFTVFYSERSPWWVQVTSTGKPGHASRF
IEDTAAEKLHKVISSILAFREKERQRLQANPHLKEGAVTSVNLTKLEGGVAYNVVPATMSASFDFRVAPD
VDMKAFEKQLQRWCQEAGEGVTFEFAQKFTEPRMTPTDDSDPWWAAFSGACKAMNLTLEPEIFPAATDSR
FIRAVGIPALGFSPMNRTPVLLHDHNERLHEDIFLRGVDIYTGLLSALASVPTLPSES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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