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Report for CCDS25957.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25957.1 Public Mus musculus 12 Pygl 23 108 98 CCDS HistoryNCBI Gene:110095Re-query CCDS DB by CCDS ID:25957.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25957.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000071250.12 ENSMUSP00000071231.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000071250.12Link to Ensembl Protein Viewer:ENSMUSP00000071231.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000071250Re-query CCDS DB by Protein ID:ENSMUSP00000071231
Original member Current member NCBI NM_133198.2 NP_573461.2 Accepted alive Link to Nucleotide Sequence:NM_133198.2Link to Protein Sequence:NP_573461.2Re-query CCDS DB by Nucleotide ID:NM_133198Re-query CCDS DB by Protein ID:NP_573461Link to BLAST:NP_573461.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_573461.2 850 Q9ET01 850 100% 0 0

Chromosomal Locations for CCDS 25957.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 70190983 70191156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 70193739 70193805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 70194233 70194367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 70195504 70195711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 70196971 70197112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 70197218 70197276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 70197398 70197545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 70197660 70197761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 70198430 70198544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 70199642 70199805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 70200132 70200278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 70201269 70201361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 70201845 70201988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 70206362 70206444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 70207671 70207782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 70211027 70211158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 70216563 70216666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 70219589 70219667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 70222825 70222926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 70227341 70227583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2553 nt):
ATGGCAAAGCCCCTGACCGACCAGGAGAAGCGACGGCAGATCAGCATCCGAGGCATCGTGGGCGTAGAGA
ATGTGGCCGAGCTGAAAAAGGGTTTCAACCGTCACCTGCACTTCACTCTGGTCAAGGACCGCAATGTGGC
CACCCCCCGCGACTACTACTTCGCCCTTGCGCACACAGTGCGCGACCACCTGGTGGGGCGCTGGATCCGT
ACACAGCAGCACTACTACGACAAGTGTCCCAAGAGGGTGTATTACCTCTCTCTGGAATTTTACATGGGCC
GAACATTACAGAACACCATGATCAACCTTGGCTTACAAAATGCCTGCGATGAGGCCATTTACCAGCTTGG
ATTGGACATGGAAGAGTTAGAAGAAATTGAAGAAGATGCCGGCCTTGGCAATGGCGGTCTTGGGAGGCTT
GCTGCCTGCTTCCTGGACTCCATGGCAACCCTGGGACTTGCAGCCTATGGCTACGGCATTCGTTATGAAT
ACGGAATCTTCAATCAGAAGATCCGAGAGGGATGGCAGGTAGAAGAGGCAGATGACTGGCTCAGGCATGG
AAACCCTTGGGAGAAGGCTCGCCCTGAATTCATGCTGCCCGTGCATTTCTACGGAAGAGTAGAGCACACC
CAGACGGGGACAAAGTGGGTCGACACCCAGGTGGTCCTGGCTCTGCCTTACGACACCCCCGTGCCTGGAT
ATATGAACAACACTGTGAACACTATGCGCCTCTGGTCGGCTCGAGCACCAAATGACTTTAACCTTCAAGA
TTTTAATGTTGGAGACTACATTCAGGCTGTGCTGGACCGGAACCTGGCTGAGAATATCTCCAGAGTGCTC
TACCCCAATGATAACTTCTTTGAAGGGAAGGAGTTGCGGCTGAAACAGGAGTACTTTGTGGTGGCTGCCA
CCCTGCAGGATGTCATCCGGCGCTTCAAGGCCTCCAAGTTCGGCTCCAAGGATGGCATGGGAACCGTGTT
TGATGCCTTTCCAGATCAGGTAGCCATCCAGCTGAATGACACACATCCTGCACTCGCCATTCCAGAGCTG
ATGAGGATTTTTGTGGACATTGAAAAACTGCCCTGGGCCAAGGCATGGGAGATCACGAAGAAGACCTTCG
CCTACACCAACCACACGGTGCTCCCGGAGGCCCTGGAGCGCTGGCCGGTGGAACTGGTGGAGAAGCTGCT
GCCTCGACACTTGGAGATCATTTATGAGATCAATCAGAAACATTTAGACAGAATTGTGGCCTTGTTTCCT
AAAGACATCAGCCGCATGCGGAGAATGTCTCTCATTGAGGAGGAAGGAGGCAAACGGATCAACATGGCCC
ACCTCTGCATCGTGGGCTGCCACGCGGTGAACGGTGTAGCAAAGATCCACTCGGACATCGTGAAGACCCA
AGTATTCAAGGACTTCAGCGAGCTAGAACCAGACAAGTTCCAGAATAAAACCAACGGGATTACCCCGAGG
CGCTGGCTCCTACTCTGCAACCCAGGGCTGGCTGACTTGATAGCGGAGAAAATTGGAGAGGATTATGTGA
AAGACCTGAGCCAGCTGACGAAGCTCCACAGTTTTGTGAGTGATGACATCTTCCTCCGGGAAATAGCCAA
AGTGAAACAGGAAAATAAGCTGAAATTCTCCCAGTTCCTGGAGAAGGAATACAAGGTGAAGATCAACCCA
TCCTCCATGTTTGATGTCCATGTGAAGCGGATCCACGAGTATAAAAGGCAGCTTCTGAACTGCCTGCATG
TGATCACCATGTACAATCGCATCAAGAAAGACCCTAAGAAATTCTTCGTGCCAAGGACAGTCATAATTGG
TGGCAAAGCTGCCCCAGGATATCACATGGCCAAAATGATCATAAAGCTGATCACCTCTGTGGCAGAAGTG
GTGAACAATGACCCCATGGTCGGCAGCAAGTTGAAAGTCATCTTCTTGGAGAACTACAGAGTGTCTCTTG
CCGAAAAAGTCATTCCAGCCACAGACCTATCGGAGCAGATCTCCACGGCAGGCACGGAAGCCTCCGGGAC
AGGCAACATGAAGTTCATGCTGAACGGGGCCCTGACCATCGGGACTATGGATGGGGCCAATGTGGAGATG
GCAGAGGAAGCTGGGGAGGAGAACCTGTTCATCTTTGGCATGAGAGTAGATGATGTGGCTGCTTTGGATA
AGAAGGGGTATGAGGCCAAAGAATATTACGAGGCCCTTCCAGAACTGAAGTTGGTCATCGACCAAATCGA
CAATGGCTTCTTTTCTCCCAATCAGCCAGACCTCTTCAAAGACATCATCAACATGTTATTTTATCATGAC
AGATTTAAAGTCTTTGCAGACTACGAAGCCTATGTCAAGTGTCAAGAAAAAGTCAGTCAGCTGTATATGA
ATCAAAAAGCCTGGAACACAATGGTACTCAAAAACATAGCTGCCTCAGGGAAGTTCTCCAGTGACCGAAC
AATTAAGGAGTATGCCAAGGACATCTGGAACATGGAGCCTTCGGATCTGAAGATTTCCCTATCCAACGAG
TCCAGCAATGGGGTCAGTGCCAATGGGAAGTGA

Translation (850 aa):
MAKPLTDQEKRRQISIRGIVGVENVAELKKGFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIR
TQQHYYDKCPKRVYYLSLEFYMGRTLQNTMINLGLQNACDEAIYQLGLDMEELEEIEEDAGLGNGGLGRL
AACFLDSMATLGLAAYGYGIRYEYGIFNQKIREGWQVEEADDWLRHGNPWEKARPEFMLPVHFYGRVEHT
QTGTKWVDTQVVLALPYDTPVPGYMNNTVNTMRLWSARAPNDFNLQDFNVGDYIQAVLDRNLAENISRVL
YPNDNFFEGKELRLKQEYFVVAATLQDVIRRFKASKFGSKDGMGTVFDAFPDQVAIQLNDTHPALAIPEL
MRIFVDIEKLPWAKAWEITKKTFAYTNHTVLPEALERWPVELVEKLLPRHLEIIYEINQKHLDRIVALFP
KDISRMRRMSLIEEEGGKRINMAHLCIVGCHAVNGVAKIHSDIVKTQVFKDFSELEPDKFQNKTNGITPR
RWLLLCNPGLADLIAEKIGEDYVKDLSQLTKLHSFVSDDIFLREIAKVKQENKLKFSQFLEKEYKVKINP
SSMFDVHVKRIHEYKRQLLNCLHVITMYNRIKKDPKKFFVPRTVIIGGKAAPGYHMAKMIIKLITSVAEV
VNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEM
AEEAGEENLFIFGMRVDDVAALDKKGYEAKEYYEALPELKLVIDQIDNGFFSPNQPDLFKDIINMLFYHD
RFKVFADYEAYVKCQEKVSQLYMNQKAWNTMVLKNIAASGKFSSDRTIKEYAKDIWNMEPSDLKISLSNE
SSNGVSANGK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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