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Report for CCDS27851.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27851.1 Public Mus musculus 15 Krt7 23 108 98 CCDS HistoryNCBI Gene:110310Re-query CCDS DB by CCDS ID:27851.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27851.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000068904.8 ENSMUSP00000069900.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000068904.8Link to Ensembl Protein Viewer:ENSMUSP00000069900.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000068904Re-query CCDS DB by Protein ID:ENSMUSP00000069900
Original member Current member NCBI NM_033073.3 NP_149064.1 Accepted alive Link to Nucleotide Sequence:NM_033073.3Link to Protein Sequence:NP_149064.1Re-query CCDS DB by Nucleotide ID:NM_033073Re-query CCDS DB by Protein ID:NP_149064Link to BLAST:NP_149064.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_149064.1 457 Q9DCV7 457 100% 0 0

Chromosomal Locations for CCDS 27851.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 101412474 101412779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101413969 101414180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101416221 101416281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101418318 101418413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101419503 101419667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101420474 101420599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101423270 101423490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101427089 101427123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101427514 101427665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1374 nt):
ATGTCCATCCACTTCAGCTCTCGCTCCACTGCTTACCCGGGCCGCGGGGCTCAGGTGCGCCTGAGCTCGG
GCCGCGCCAGCTTCGGCAGCAGGAGCCTCTATGGCCTGGGCTCATCAAGGCCTCGTGTGGCCGTGCGCTC
CGCTTATGGGGGCCCGGTGGGCGCTGGCATCCGCGAGATCACCATCAATCAGAGCTTGCTGGCGCCGCTG
AGTGTGGACATCGATCCCACCATCCAGCAGGTGCGCCAGGAGGAGCGCGAGCAGATCAAGACCCTCAACA
ACAAATTCGCCTCCTTCATCGACAAGGTACGCTTCCTGGAACAGCAGAACAAGATGCTGGAGACCAAGTG
GGCGCTGCTGCAGGAACAGAAGTCAGCCAAGAGCAGCCAGCTTCCCCGAATCTTTGAGGCTCAGATTGCT
GGGCTGAGGCAGCAGCTCGAGACACTGCAGCTGGATGGGGGCCGCCTGGAGGTGGAACTGCGGAACATGC
AGGATGTGGTGGAAGATTTCAAGAATAAGTATGAAGAGGAGATCAACCGACGCACGGCTGCTGAGAATGA
GTTTGTGTTGCTGAAGAAGGATGTGGATGCCGCCTACACGAACAAGGTGGAGTTGGAGGCCAAGGCGGAC
AGTCTGCAGGATGAGATCAACTTCCTCAAGACCCTTCACGAGACAGAGTTAGCAGAGCTGCAGTCGCAGA
TCTCAGACACATCTGTGGTGCTGTCCATGGACAACAGCCGCTCCCTGGACTTGGATGGTATCATTGCTGA
CGTCAAAGCCCAGTATGAGGAGATGGCCAACCACAGCCGGGCAGAGGCTGAAGCTTGGTACCAGACCAAG
TTTGAGACACTCCAGGCCCAGGCTGGGAAGCACGGGGATGACCTCCGCAACACCCGGAATGAGATTGCGG
AGATGAACCGCTCTATCCAGAGGCTGCAGGCAGAGATTGACACCTTGAAGAACCAGCGTGCCAAGTTAGA
GTCCAGCATCGCAGAGGCTGAGGAACAAGGGGAGCTGGCAATCAAGGATGCTCATGCTAAGCAGGGGGAG
CTGGAGGCTGCCCTGCAGAAGGCCAAGCAGGATGTGGCCCGGCAACTTCGAGAGTACCAGGAGCTCCTGA
ACACCAAGCTGGCGCTGGACATTGAGATCGCCACCTACCGCAAGCTGCTGGAGGGCGAGGAGAGCCGGTT
GTCTGGAGACGGAATGGGACCTGTGAATATCTCTGTTGTGAATTCCACTGGGGGCAATGGTGGCAAGCTT
ATCTTCGGAGGAACCATGGGAAGCAATGCTCTGAGCTTCAGTGGGGGACCCGGAGCCCTCAGGGCCTATT
CCATCAAGACCACATCTACTACCCGCAGGGGCACCCACAATTGA

Translation (457 aa):
MSIHFSSRSTAYPGRGAQVRLSSGRASFGSRSLYGLGSSRPRVAVRSAYGGPVGAGIREITINQSLLAPL
SVDIDPTIQQVRQEEREQIKTLNNKFASFIDKVRFLEQQNKMLETKWALLQEQKSAKSSQLPRIFEAQIA
GLRQQLETLQLDGGRLEVELRNMQDVVEDFKNKYEEEINRRTAAENEFVLLKKDVDAAYTNKVELEAKAD
SLQDEINFLKTLHETELAELQSQISDTSVVLSMDNSRSLDLDGIIADVKAQYEEMANHSRAEAEAWYQTK
FETLQAQAGKHGDDLRNTRNEIAEMNRSIQRLQAEIDTLKNQRAKLESSIAEAEEQGELAIKDAHAKQGE
LEAALQKAKQDVARQLREYQELLNTKLALDIEIATYRKLLEGEESRLSGDGMGPVNISVVNSTGGNGGKL
IFGGTMGSNALSFSGGPGALRAYSIKTTSTTRRGTHN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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