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Report for CCDS25903.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25903.1 Public Mus musculus 12 Dtd2 23 108 98 CCDS HistoryNCBI Gene:328092Re-query CCDS DB by CCDS ID:25903.1Re-query CCDS DB by GeneID:328092See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25903.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000021339.7 ENSMUSP00000021339.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000021339.7Link to Ensembl Protein Viewer:ENSMUSP00000021339.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000021339Re-query CCDS DB by Protein ID:ENSMUSP00000021339
Original member Current member NCBI NM_029545.3 NP_083821.1 Accepted alive Link to Nucleotide Sequence:NM_029545.3Link to Protein Sequence:NP_083821.1Re-query CCDS DB by Nucleotide ID:NM_029545Re-query CCDS DB by Protein ID:NP_083821Link to BLAST:NP_083821.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083821.1 168 Q8BHA3-1 168 100% 0 0

Chromosomal Locations for CCDS 25903.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 51999548 51999873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52004879 52004948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52006375 52006485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (507 nt):
ATGGCGGACGGTGGTCGTGTGGCCCAGGCTCGTGCGCTCCTGCAGCAGTGCCTGCACGCTCGCCTGCAAG
TGCGCCCGGCCGATGGAGACGCCGCGGCGCAGTGGGTGGAGATTCGGAGAGGATTGGTGATCTATGTGTG
TTTCTTCAAGGGAGCTGACACAGACCTTCTCCCCAAAATGGTTAATACGCTGTTAAATGTGAAGTTAAGC
GAAACGGAAACCGGCAAGCACGTCTCCATCCTCGATCTGCCTGGCGATGTTCTGATCATCCCGCAAGCCA
CCCTCGGGGGCAGGGTGAAAGGGCGGAGCATGCAGTACCACTCTAACTCTGGAAAGGAGGAGGGCTCAGA
ACTGTACTCCCAGTTTGTGAGTCTGTGTGAAAAAGCCGTGGCCAACAACACCAAGAGTGTAGAAGCGGGG
GTTGCGGTGGCGCACGGCACGTACGGGAACAGGCAAGTGTTAAAGCTGGACACCAATGGACCCTACACGC
ACCTCATTGAGTTTTGA

Translation (168 aa):
MADGGRVAQARALLQQCLHARLQVRPADGDAAAQWVEIRRGLVIYVCFFKGADTDLLPKMVNTLLNVKLS
ETETGKHVSILDLPGDVLIIPQATLGGRVKGRSMQYHSNSGKEEGSELYSQFVSLCEKAVANNTKSVEAG
VAVAHGTYGNRQVLKLDTNGPYTHLIEF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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