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Report for CCDS28468.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28468.1 Public Mus musculus 17 Prss21 23 108 98 CCDS HistoryNCBI Gene:57256Re-query CCDS DB by CCDS ID:28468.1Re-query CCDS DB by GeneID:57256See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 28468.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000024928.3 ENSMUSP00000024928.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000024928.3Link to Ensembl Protein Viewer:ENSMUSP00000024928.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000024928Re-query CCDS DB by Protein ID:ENSMUSP00000024928
Original member Current member NCBI NM_020487.4 NP_065233.2 Accepted alive Link to Nucleotide Sequence:NM_020487.4Link to Protein Sequence:NP_065233.2Re-query CCDS DB by Nucleotide ID:NM_020487Re-query CCDS DB by Protein ID:NP_065233Link to BLAST:NP_065233.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065233.2 324 Q9JHJ7 324 100% 0 0

Chromosomal Locations for CCDS 28468.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 23868095 23868197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 23868299 23868325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 23868616 23868781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 23869359 23869642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 23872371 23872525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 23872795 23873034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (975 nt):
ATGGGCGCGCGGGGCAAGACGTTGGTGCCACTGCTGGTGGTTGTGGCGACTGCGGCGATGGCCTTACAGT
CAACCTATTTGCAGGTGGATCCTGAGAAACCCGAACTGCAGGAACCCGACCTATTGTCAGGGCCCTGCGG
TCACAGGACCATCCCTTCCCGTATAGTGGGTGGCGATGATGCTGAGCTTGGCCGCTGGCCGTGGCAAGGG
AGCCTGCGTGTATGGGGCAACCACTTATGTGGCGCAACCTTGCTCAACCGCCGCTGGGTGCTTACAGCTG
CCCACTGCTTCCAAAAGGATAACGATCCTTTTGACTGGACAGTCCAGTTTGGTGAGCTGACATCCAGGCC
ATCTCTCTGGAACCTACAGGCCTATTCCAACCGTTACCAAATAGAAGATATTTTCCTGAGCCCCAAGTAC
TCGGAGCAGTATCCCAATGACATAGCCCTGCTGAAGCTGTCATCTCCAGTCACCTACAATAACTTCATCC
AGCCCATCTGCCTCCTGAACTCCACGTACAAGTTTGAGAACCGAACTGACTGCTGGGTGACCGGCTGGGG
GGCTATTGGAGAAGATGAGAGTCTGCCATCTCCCAACACTCTCCAGGAAGTGCAGGTAGCTATTATCAAC
AACAGCATGTGTAACCATATGTACAAAAAGCCAGACTTCCGCACGAACATCTGGGGAGACATGGTTTGCG
CTGGCACTCCTGAAGGTGGCAAGGATGCCTGCTTTGGTGACTCGGGAGGACCCTTGGCCTGCGACCAGGA
TACGGTGTGGTATCAGGTTGGAGTTGTGAGCTGGGGAATAGGCTGTGGTCGCCCCAATCGCCCTGGAGTC
TATACCAACATCAGTCATCACTACAACTGGATCCAGTCAACCATGATCCGCAATGGGCTGCTCAGGCCTG
ACCCAGTCCCCCTGCTACTGTTTCTCACTCTGGCCTGGGCTTCCTCTTTGCTGAGGCCTGCCTGA

Translation (324 aa):
MGARGKTLVPLLVVVATAAMALQSTYLQVDPEKPELQEPDLLSGPCGHRTIPSRIVGGDDAELGRWPWQG
SLRVWGNHLCGATLLNRRWVLTAAHCFQKDNDPFDWTVQFGELTSRPSLWNLQAYSNRYQIEDIFLSPKY
SEQYPNDIALLKLSSPVTYNNFIQPICLLNSTYKFENRTDCWVTGWGAIGEDESLPSPNTLQEVQVAIIN
NSMCNHMYKKPDFRTNIWGDMVCAGTPEGGKDACFGDSGGPLACDQDTVWYQVGVVSWGIGCGRPNRPGV
YTNISHHYNWIQSTMIRNGLLRPDPVPLLLFLTLAWASSLLRPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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