NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS84369.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84369.1 Public Mus musculus 18 Stard4 23 108 98 CCDS HistoryNCBI Gene:170459Re-query CCDS DB by CCDS ID:84369.1Re-query CCDS DB by GeneID:170459See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84369.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000119991.7 ENSMUSP00000114109.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000119991.7Link to Ensembl Protein Viewer:ENSMUSP00000114109.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000119991Re-query CCDS DB by Protein ID:ENSMUSP00000114109
Original member Current member NCBI NM_001347624.1 NP_001334553.1 Accepted alive Link to Nucleotide Sequence:NM_001347624.1Link to Protein Sequence:NP_001334553.1Re-query CCDS DB by Nucleotide ID:NM_001347624Re-query CCDS DB by Protein ID:NP_001334553Link to BLAST:NP_001334553.1

Chromosomal Locations for CCDS 84369.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 33203810 33203815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 33205221 33205325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 33206120 33206246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 33208177 33208226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 33209043 33209157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 33213634 33213671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (441 nt):
ATGGCTGACCCTGAGAGCCCGTGGTCACAGATTGGCAGGAAGATCAAACTGGAAGGACTGTCTGATGTTG
CCTCTATTTCAACTAAACTTCAGAACACTCTGATCCAGTATCACAGCATCGAAGAAGATGAGTGGCGAGT
TGCCAAAAAAGCGAAAGATGTGACCGTTTGGAGAAAACCCTCAGAAGAGTTTAATGGGTATCTATATAAA
GCTCAAGGAGTTATGGATGACGTGGTCAATAATGTAATAGACCATATCCGCCCAGGGCCCTGGCGCTTGG
ACTGGGACCGGTTAATGACCTCCCTGGATGTTCTGGAGCACTTTGAAGAGTATCACAGACATTTGGGGAA
GAGATCACCCCTTCCAGAACACTGTAGGCATCCCATTCTGATGAGAGAAGACTGTGAGTGTCAGTTCTCA
CGAGACATGGATCTGGTGTGA

Translation (146 aa):
MADPESPWSQIGRKIKLEGLSDVASISTKLQNTLIQYHSIEEDEWRVAKKAKDVTVWRKPSEEFNGYLYK
AQGVMDDVVNNVIDHIRPGPWRLDWDRLMTSLDVLEHFEEYHRHLGKRSPLPEHCRHPILMREDCECQFS
RDMDLV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH