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Report for CCDS29659.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29659.1 Public Mus musculus 19 Or5b116 23 108 98 CCDS HistoryNCBI Gene:258231Re-query CCDS DB by CCDS ID:29659.1Re-query CCDS DB by GeneID:258231See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29659.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000096203.1 ENSMUSP00000093917.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000096203.1Link to Ensembl Protein Viewer:ENSMUSP00000093917.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000096203Re-query CCDS DB by Protein ID:ENSMUSP00000093917
Original member Current member EBI ENSMUST00000217482.1 ENSMUSP00000149948.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000217482.1Link to Ensembl Protein Viewer:ENSMUSP00000149948.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000217482Re-query CCDS DB by Protein ID:ENSMUSP00000149948
Original member Current member EBI ENSMUST00000217249.1 ENSMUSP00000150749.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000217249.1Link to Ensembl Protein Viewer:ENSMUSP00000150749.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000217249Re-query CCDS DB by Protein ID:ENSMUSP00000150749
Original member Current member NCBI NM_207132.2 NP_997015.2 Accepted alive Link to Nucleotide Sequence:NM_207132.2Link to Protein Sequence:NP_997015.2Re-query CCDS DB by Nucleotide ID:NM_207132Re-query CCDS DB by Protein ID:NP_997015Link to BLAST:NP_997015.2

Chromosomal Locations for CCDS 29659.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 13445014 13445958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGGAGAATATTTCAGAGGTTACTGAATTTATTCTTGCAGGCTTGACAGATGCCCCAGAGCTTCAGATTC
CTTTGTTTATTATCTTCACTCTCATTTATTTGATCGCACTGTTTGGGAATCTTGGGATGATCATGTTGAT
TCTGCTGGACTCCCGACTCCACACTCCCATGTACTTTTTCCTCTGTAACCTCTCCCTGGTGGACTGTGTT
TATGCCTCAGCAATCACCCCCAAGGTGATGGAAGGGTTTCTCACAGGAAGTAAGACCATATCATTAAATG
GGTGTGCTGCCCAGATGTTCTTCTTTGTAGCCTTTATTGCTATTGAAAGTTTGATCCTTGCCTCGATGGC
CTATGACCGTCATGCAGCAGTGTGCAAACCCCTGCACTATACTACCATTATGACAAGTACCACCTGCATT
CTAATTGTCACCTGCTGCTACATGTGTGGGATCTTACAATCTTCTGTCCATGTTGCTCTGGCATTTTGTC
TTTCCTTCTGTCATTCCAACGTGATTAATCACTTTTTCTGTGACATTCCCCCACTGCTGGACATTTCTTG
TTCTGACACCCACACAAATGAGATTACACTGCTTGTCTTGGCTACATTGGATGTTGTTTTCACTCTCTTA
GTTATCTTAAACACTTACCTGCTTATTTTCATTGCTATCCTGAGGATGCGTTCAGCTGAAGCACAGAGGA
AGGCATTCTCTACCTGTGCATCTCATCTCATCACTGTGTCTATCTTCTTTGGTTCCCTTATATTCATGTA
CTTACAGCCCAGTTTCAATCATTCCATGGACACAGACAAAATTGCATCTGTGTTTTATACAATGGTCATT
CCTATGCTGAACCCTGTGGTCTACAGCCTGAGGAACAAAGAGGTAAAAAATGCATTTAAGAAAGTTGTTG
AAAAATTAATGTCTTCATTTCATTTAGTTGATTAA

Translation (314 aa):
MENISEVTEFILAGLTDAPELQIPLFIIFTLIYLIALFGNLGMIMLILLDSRLHTPMYFFLCNLSLVDCV
YASAITPKVMEGFLTGSKTISLNGCAAQMFFFVAFIAIESLILASMAYDRHAAVCKPLHYTTIMTSTTCI
LIVTCCYMCGILQSSVHVALAFCLSFCHSNVINHFFCDIPPLLDISCSDTHTNEITLLVLATLDVVFTLL
VILNTYLLIFIAILRMRSAEAQRKAFSTCASHLITVSIFFGSLIFMYLQPSFNHSMDTDKIASVFYTMVI
PMLNPVVYSLRNKEVKNAFKKVVEKLMSSFHLVD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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