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Report for CCDS54830.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54830.1 Public Homo sapiens 5 EXOC3 24 110 108 CCDS HistoryNCBI Gene:11336Re-query CCDS DB by CCDS ID:54830.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54830.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000315013.9 ENSP00000323377.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000315013.9Link to Ensembl Protein Viewer:ENSP00000323377.5Re-query CCDS DB by Nucleotide ID:ENST00000315013Re-query CCDS DB by Protein ID:ENSP00000323377
Original member Current member EBI ENST00000512944.6 ENSP00000425587.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000512944.6Link to Ensembl Protein Viewer:ENSP00000425587.1Re-query CCDS DB by Nucleotide ID:ENST00000512944Re-query CCDS DB by Protein ID:ENSP00000425587
Original member Current member NCBI NM_007277.5 NP_009208.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007277.5Link to Protein Sequence:NP_009208.2Re-query CCDS DB by Nucleotide ID:NM_007277Re-query CCDS DB by Protein ID:NP_009208Link to BLAST:NP_009208.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_009208.2 745 O60645 745 100% 0 0

Chromosomal Locations for CCDS 54830.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 446206 446349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 447533 447752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 453370 454051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 456889 457006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 457900 458025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 459359 459459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 461960 462070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 462157 462307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 464290 464412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 465111 465272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 465718 465845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 466727 466898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2238 nt):
ATGAAGGAGACAGACCGGGAGGCCGTTGCGACAGCAGTGCAAAGGGTTGCTGGGATGCTCCAGCGCCCGG
ACCAGCTGGACAAGGTGGAGCAGTATCGCAGGAGAGAAGCGCGGAAGAAGGCCTCCGTGGAGGCCAGATT
GAAGGCCGCCATCCAGTCACAGTTGGACGGGGTGCGCACAGGCCTCAGCCAGCTCCACAACGCCCTGAAT
GACGTCAAAGACATCCAGCAGTCGCTGGCAGACGTCAGCAAGGACTGGAGGCAGAGCATCAACACCATTG
AGAGCCTCAAGGACGTCAAAGACGCCGTGGTGCAGCACAGCCAGCTCGCCGCAGCCGTGGAGAACCTCAA
GAACATCTTCTCAGTGCCTGAGATTGTGAGGGAGACCCAGGACCTAATTGAACAAGGGGCACTCCTGCAA
GCCCACCGGAAGCTGATGGACCTGGAGTGCTCCCGGGACGGGCTGATGTACGAGCAGTACCGCATGGACA
GTGGGAACACGCGTGACATGACCCTCATCCATGGCTACTTTGGCAGCACGCAGGGGCTCTCTGATGAGCT
GGCTAAGCAGCTGTGGATGGTGCTGCAGAGGTCACTGGTCACTGTCCGCCGTGACCCCACCTTGCTGGTC
TCAGTTGTCAGGATCATTGAAAGGGAAGAGAAAATTGACAGGCGCATACTTGACCGGAAAAAGCAAACTG
GCTTTGTTCCTCCTGGGAGGCCCAAGAATTGGAAGGAGAAAATGTTCACCATCTTGGAGAGGACTGTGAC
CACCAGAATTGAGGGCACACAGGCAGATACCAGAGAGTCTGACAAGATGTGGCTTGTCCGCCACCTGGAA
ATTATAAGGAAGTACGTCCTGGATGACCTCATTGTCGCCAAAAACCTGATGGTTCAGTGCTTTCCTCCCC
ACTATGAGATCTTTAAGAACCTCCTGAACATGTACCACCAAGCCCTGAGCACGCGGATGCAGGACCTCGC
ATCGGAAGACCTGGAAGCCAATGAGATCGTGAGCCTCTTGACGTGGGTCTTAAACACCTACACAAGTACT
GAGATGATGAGGAACGTGGAGCTGGCCCCGGAAGTGGATGTCGGCACCCTGGAGCCATTGCTTTCTCCAC
ACGTGGTCTCTGAGCTGCTTGACACGTACATGTCCACGCTCACTTCAAACATCATCGCCTGGCTGCGGAA
AGCGCTGGAGACAGACAAGAAAGACTGGGTCAAAGAGACAGAGCCAGAAGCCGACCAGGACGGGTACTAC
CAGACCACACTCCCTGCCATTGTCTTCCAGATGTTTGAACAGAATCTTCAAGTTGCTGCTCAGATAAGTG
AAGATTTGAAAACAAAGGTACTAGTTTTATGTCTTCAGCAGATGAATTCTTTCCTAAGCAGATATAAAGA
TGAAGCGCAGCTGTATAAAGAAGAGCACCTGAGGAATCGGCAGCACCCTCACTGCTACGTTCAGTACATG
ATCGCCATCATCAACAACTGCCAGACCTTCAAGGAATCCATAGTCAGTTTAAAAAGAAAGTATTTAAAGA
ATGAAGTGGAAGAGGGTGTGTCTCCGAGCCAGCCCAGCATGGACGGGATTTTAGACGCCATCGCGAAGGA
GGGCTGCAGCGGTTTGCTGGAGGAGGTCTTCCTGGACCTGGAGCAACATCTGAATGAATTGATGACGAAG
AAGTGGCTATTAGGGTCAAACGCTGTAGACATTATCTGTGTCACCGTGGAAGACTATTTCAACGATTTTG
CCAAAATTAAAAAGCCGTATAAGAAGAGGATGACGGCCGAGGCGCACCGGCGCGTGGTGGTGGAGTACCT
GCGGGCGGTCATGCAGAAGCGCATTTCCTTCCGGAGCCCGGAGGAGCGCAAGGAGGGTGCCGAGAAGATG
GTTAGGGAGGCAGAGCAGCTGCGCTTCCTGTTCCGGAAGCTGGCGTCCGGTTTCGGGGAAGACGTGGACG
GATACTGCGACACCATCGTGGCTGTGGCCGAAGTGATCAAGCTGACAGACCCTTCTCTGCTCTACCTGGA
GGTCTCCACTCTGGTCAGCAAGTATCCAGACATCAGGGATGACCACATCGGTGCGCTGCTGGCTGTGCGT
GGGGACGCCAGCCGTGACATGAAGCAGACCATCATGGAGACCCTGGAGCAGGGCCCAGCACAGGCCAGCC
CCAGCTACGTGCCCCTCTTCAAGGACATTGTGGTGCCCAGCCTGAACGTGGCCAAGCTGCTCAAGTAG

Translation (745 aa):
MKETDREAVATAVQRVAGMLQRPDQLDKVEQYRRREARKKASVEARLKAAIQSQLDGVRTGLSQLHNALN
DVKDIQQSLADVSKDWRQSINTIESLKDVKDAVVQHSQLAAAVENLKNIFSVPEIVRETQDLIEQGALLQ
AHRKLMDLECSRDGLMYEQYRMDSGNTRDMTLIHGYFGSTQGLSDELAKQLWMVLQRSLVTVRRDPTLLV
SVVRIIEREEKIDRRILDRKKQTGFVPPGRPKNWKEKMFTILERTVTTRIEGTQADTRESDKMWLVRHLE
IIRKYVLDDLIVAKNLMVQCFPPHYEIFKNLLNMYHQALSTRMQDLASEDLEANEIVSLLTWVLNTYTST
EMMRNVELAPEVDVGTLEPLLSPHVVSELLDTYMSTLTSNIIAWLRKALETDKKDWVKETEPEADQDGYY
QTTLPAIVFQMFEQNLQVAAQISEDLKTKVLVLCLQQMNSFLSRYKDEAQLYKEEHLRNRQHPHCYVQYM
IAIINNCQTFKESIVSLKRKYLKNEVEEGVSPSQPSMDGILDAIAKEGCSGLLEEVFLDLEQHLNELMTK
KWLLGSNAVDIICVTVEDYFNDFAKIKKPYKKRMTAEAHRRVVVEYLRAVMQKRISFRSPEERKEGAEKM
VREAEQLRFLFRKLASGFGEDVDGYCDTIVAVAEVIKLTDPSLLYLEVSTLVSKYPDIRDDHIGALLAVR
GDASRDMKQTIMETLEQGPAQASPSYVPLFKDIVVPSLNVAKLLK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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