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Report for CCDS37470.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37470.1 Public Mus musculus 17 Zfp758 23 108 98 CCDS HistoryNCBI Gene:224598Re-query CCDS DB by CCDS ID:37470.1Re-query CCDS DB by GeneID:224598See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37470.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000088765.8 ENSMUSP00000086143.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000088765.8Link to Ensembl Protein Viewer:ENSMUSP00000086143.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000088765Re-query CCDS DB by Protein ID:ENSMUSP00000086143
Original member Current member EBI ENSMUST00000121315.1 ENSMUSP00000113532.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000121315.1Link to Ensembl Protein Viewer:ENSMUSP00000113532.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000121315Re-query CCDS DB by Protein ID:ENSMUSP00000113532
Original member NCBI NM_001357990.1 NP_001344919.1 Updated not alive Link to Nucleotide Sequence:NM_001357990.1Link to Protein Sequence:NP_001344919.1Re-query CCDS DB by Nucleotide ID:NM_001357990Re-query CCDS DB by Protein ID:NP_001344919
Current member NCBI NM_001357990.2 NP_001344919.1 Accepted alive Link to Nucleotide Sequence:NM_001357990.2Link to Protein Sequence:NP_001344919.1Re-query CCDS DB by Nucleotide ID:NM_001357990Re-query CCDS DB by Protein ID:NP_001344919Link to BLAST:NP_001344919.1
Original member Current member NCBI NM_145484.2 NP_663459.2 Accepted alive Link to Nucleotide Sequence:NM_145484.2Link to Protein Sequence:NP_663459.2Re-query CCDS DB by Nucleotide ID:NM_145484Re-query CCDS DB by Protein ID:NP_663459Link to BLAST:NP_663459.2

Chromosomal Locations for CCDS 37470.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 22372059 22372088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 22373643 22373769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 22374788 22376286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1656 nt):
ATGAATTCTTCTCTGGTAAATGCTCCCCAGGGTCTGTTAACATTCAAGGATGTGGCAGTGGACTTCTCAC
AGGAGGAATGGGAATGTCTTGACTGTGCTCAGAGGGCATTGTACATGGATGTTATGTTGGAGAATTACAA
CAATCTATTTTTTGTGGAAAATCATTACATATGTCATAAATATGAGAACTTCTTGGATCAAGACACACAG
CATATTGTCCATGAGGATATAAATATCAAACTGAAGTCTTATAAATGTCATGAACTTGCCAAAATCATAT
ATGAATCCAGTCAAAGTACACCTTATAAAACTAACCTCAGGGATACATCTATTGAATCGTCAAACCTCAA
CAGACATGAAACTGGAAACACCAGAGAACCCTGCAAATATAAAAACTGTGTAAACTGTTTAAATTTGTGT
TCTAGCATTGGTCTAAATCAAGGAATCCACATCGGAAAGAAAGATGATGAGACATTTTACTCTAACCAAA
ACCTCATGCTGAAACAAACCAAAAGCAGAAAGAAACATTACAAATGTAGTGAATATGACAAATGCTTCAT
CCAGAAAGGTGATCTTAGAAGTCATCAGAGAATGCATACTGGAGAGAAACCTTACAAATGTAGTGAATGT
AACAAATGCTTTACTCTCAAAAGTAATCTTGGAATTCATCAGAAAATTCATACAGGAAAGAAACCTTACA
GATGTTTTGATTGTGACAAATGCTTTACCAACAAATATAATCTTAGAACGCATCAAAGAATACATTCAGG
AGAGAAACCTTACAAATGTAGTGAATGTGACAAATGCTTTATCCAAAAATTTAGCCTTATTACTCATCAG
AGAATTCATACAGGAGAGAAACCTTACAAATGTAGTGAGTGTGACAAATGCTTTACCAACAAAAGTGATC
TTAGAGGTCATCAGAGAGTTCATACAGGAGAGAAACCTTACAAATGTAGTGAATGTGACAAATGCTTTAC
CCACAAAGGAAGTCTTAGTATTCATCATAGACTACATTCAGGAGAGAAACCTTACAAATGTAGTGAATGT
GACAAATGCTTTACACAAAAATGCAATCTTCTTACTCATCAGAGAATTCATACAGGAGAGAAACCTTATA
AATGTGCTGAATGTGACAAATGCTTTACTAACAGAAGTGATCTTAGAAGTCATAAGAAAATTCATACAGG
AGAGAAACCTTACAAATGTAGTGAATGTGACAAATGCTTTACCCACAAATTCAGTCTTAGTATTCATCAG
AGATTACATTCAGGAGAGAAACCTTACAAATGTAGTGAATGTGACAAATGCTTTACCCAAAAATGCAATC
TTCTTATTCATCAGAGAATTCATACAGAAAAGAAACCTTACAAATGTAGTGAATGTGACAAATGCTTTAT
CCAAAAATGCAGTCTTCTTATTCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGTGCTGAATGT
GCCAAATGCTTTACCGACAAAAGTGATCTTATAAATCATCAGAGAATTCACACAGGAGAGAAACCTTACA
AATGTAGTGAATGTGACAAATGCTTTACCCACAAATGTAGTCTTAGTATTCATCAGGGGATTCATGCAAG
AGCAAAACTTAAAAAATATAGTGAATGTGATAAATTCTTTATCTAG

Translation (551 aa):
MNSSLVNAPQGLLTFKDVAVDFSQEEWECLDCAQRALYMDVMLENYNNLFFVENHYICHKYENFLDQDTQ
HIVHEDINIKLKSYKCHELAKIIYESSQSTPYKTNLRDTSIESSNLNRHETGNTREPCKYKNCVNCLNLC
SSIGLNQGIHIGKKDDETFYSNQNLMLKQTKSRKKHYKCSEYDKCFIQKGDLRSHQRMHTGEKPYKCSEC
NKCFTLKSNLGIHQKIHTGKKPYRCFDCDKCFTNKYNLRTHQRIHSGEKPYKCSECDKCFIQKFSLITHQ
RIHTGEKPYKCSECDKCFTNKSDLRGHQRVHTGEKPYKCSECDKCFTHKGSLSIHHRLHSGEKPYKCSEC
DKCFTQKCNLLTHQRIHTGEKPYKCAECDKCFTNRSDLRSHKKIHTGEKPYKCSECDKCFTHKFSLSIHQ
RLHSGEKPYKCSECDKCFTQKCNLLIHQRIHTEKKPYKCSECDKCFIQKCSLLIHQRIHTGEKPYKCAEC
AKCFTDKSDLINHQRIHTGEKPYKCSECDKCFTHKCSLSIHQGIHARAKLKKYSECDKFFI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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