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Report for CCDS24822.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24822.1 Public Mus musculus 11 Adora2b 23 108 98 CCDS HistoryNCBI Gene:11541Re-query CCDS DB by CCDS ID:24822.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24822.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000018644.2 ENSMUSP00000018644.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000018644.2Link to Ensembl Protein Viewer:ENSMUSP00000018644.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000018644Re-query CCDS DB by Protein ID:ENSMUSP00000018644
Original member Current member NCBI NM_007413.4 NP_031439.2 Accepted alive Link to Nucleotide Sequence:NM_007413.4Link to Protein Sequence:NP_031439.2Re-query CCDS DB by Nucleotide ID:NM_007413Re-query CCDS DB by Protein ID:NP_031439Link to BLAST:NP_031439.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031439.2 332 Q60614 332 100% 0 0

Chromosomal Locations for CCDS 24822.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 62249102 62249436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62265062 62265725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (999 nt):
ATGCAGCTAGAGACGCAAGACGCGCTGTACGTGGCGCTGGAGCTGGTTATCGCTGCGCTGGCGGTGGCGG
GCAACGTGCTGGTGTGCGCCGCGGTGGGAGCCTCGAGTGCATTACAGACCCCCACCAACTACTTTCTGGT
ATCCCTGGCGACGGCAGACGTGGCCGTGGGACTCTTCGCCATCCCCTTTGCCATCACCATCAGCTTGGGC
TTCTGCACGGACTTCCACGGCTGCCTCTTCCTCGCCTGCTTCGTGCTGGTGCTCACACAGAGCTCCATCT
TTAGCCTCTTGGCGGTGGCTGTCGACCGATATCTGGCCATTCGCGTCCCGCTCAGGTATAAAGGTTTGGT
CACTGGGACACGAGCGAGAGGGATCATTGCTGTCCTCTGGGTCCTTGCCTTTGGCATTGGATTGACTCCG
TTCCTGGGGTGGAACAGTAAAGACAGTGCCACCAGCAACTGCACAGAACTGGGGGATGGCATCGCGAATA
AAAGCTGCTGTCCTGTGACATGTCTCTTTGAGAATGTGGTCCCCATGAGCTACATGGTGTATTTCAACTT
CTTTGGGTGTGTCCTTCCTCCACTGCTCATAATGCTGGTGATCTACATCAAAATCTTCATGGTGGCCTGC
AAGCAGCTTCAGCGCATGGAACTGATGGACCACTCCAGGACCACTCTCCAGCGGGAGATCCACGCAGCCA
AGTCACTGGCTATGATCGTGGGCATTTTTGCTCTGTGTTGGCTCCCAGTGCATGCCATCAACTGTATCAC
CCTCTTCCATCCAGCCCTGGCCAAGGACAAGCCCAAGTGGGTGATGAATGTGGCCATCCTCCTGTCACAT
GCCAATTCAGTTGTCAACCCCATTGTCTATGCCTACAGGAACCGAGACTTCCGCTACAGTTTCCACAAGA
TCATCTCCAGATATGTTCTCTGCCAGGCCGAGACCAAGGGTGGGAGTGGGCAGGCTGGGGCGCAGTCTAC
TCTCAGTCTGGGCTTATGA

Translation (332 aa):
MQLETQDALYVALELVIAALAVAGNVLVCAAVGASSALQTPTNYFLVSLATADVAVGLFAIPFAITISLG
FCTDFHGCLFLACFVLVLTQSSIFSLLAVAVDRYLAIRVPLRYKGLVTGTRARGIIAVLWVLAFGIGLTP
FLGWNSKDSATSNCTELGDGIANKSCCPVTCLFENVVPMSYMVYFNFFGCVLPPLLIMLVIYIKIFMVAC
KQLQRMELMDHSRTTLQREIHAAKSLAMIVGIFALCWLPVHAINCITLFHPALAKDKPKWVMNVAILLSH
ANSVVNPIVYAYRNRDFRYSFHKIISRYVLCQAETKGGSGQAGAQSTLSLGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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