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Report for CCDS15393.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15393.1 Public Mus musculus 1 Abl2 23 108 98 CCDS HistoryNCBI Gene:11352Re-query CCDS DB by CCDS ID:15393.1Re-query CCDS DB by GeneID:11352See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15393.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000027888.12 ENSMUSP00000027888.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000027888.12Link to Ensembl Protein Viewer:ENSMUSP00000027888.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000027888Re-query CCDS DB by Protein ID:ENSMUSP00000027888
Original member Current member NCBI NM_009595.3 NP_033725.2 Accepted alive Link to Nucleotide Sequence:NM_009595.3Link to Protein Sequence:NP_033725.2Re-query CCDS DB by Nucleotide ID:NM_009595Re-query CCDS DB by Protein ID:NP_033725Link to BLAST:NP_033725.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033725.2 1182 Q4JIM5 1182 99.7462% 0 3

Chromosomal Locations for CCDS 15393.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 156559049 156559205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156620839 156620901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156622485 156622655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156625288 156625583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156629853 156630125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156631345 156631429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156633080 156633257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156633753 156633937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156635065 156635217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156636818 156636907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156640439 156640612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156640993 156642716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3549 nt):
ATGGGGCAGCAGGTGGGCCGCGTCGGGGAGGCTCCGGGGCTCCAGCAGCCGCAGCCGCGCGGGATCCGGG
GCAGCAGCGCAGCCAGGCCCTCGGGCCGCAGGCGGGACCCGGCGGGGCGTACCGCAGACGCCGGCTTCAA
CGTCTTCACCCAGCACGATCACTTTGCCAGCTGTGTGGAGGATGGATTTGAGGGAGACAAGACTGGAGGC
AGTAGTCCAGAAGTTTTGCACCGCCCGTTTGGCTGTGATGCTGAATCTCAGGCACTGAATGAAGCGATCA
GGTGGAGCTCCAAGGAGAACTTGCTGGGAGCCACTGAGAGTGACCCTAATCTCTTTGTTGCACTTTATGA
CTTTGTGGCAAGTGGTGATAACACACTCAGTATCACTAAAGGTGAAAAGCTGCGAGTCCTTGGTTATAAC
CAGAATGGCGAGTGGAGTGAAGTTCGCTCCAAGAATGGACAGGGTTGGGTGCCAAGCAACTACATCACTC
CAGTTAATAGCCTGGAGAAACATTCCTGGTACCACGGACCTGTATCCCGCAGCGCAGCAGAGTATCTCCT
CAGCAGCCTAATCAATGGCAGCTTCCTGGTTCGAGAGAGTGAGAGCAGCCCTGGGCAGCTGTCCATCTCT
CTCAGGTATGAGGGACGTGTGTATCACTACAGGATCAATACCACCACAGACAGCAAGGTGTACGTGACAG
CTGAGAGCCGCTTTAGCACCTTGGCAGAGCTTGTTCACCACCACTCCACAGTTGCTGATGGGCTAGTGAC
CACGCTGCACTACCCAGCACCGAAGTGCAACAAGCCAACCGTCTATGGCGTGTCTCCTATCCATGACAAG
TGGGAAATGGAACGGACAGATATCACCATGAAGCACAAACTTGGGGGCGGTCAGTACGGAGAGGTTTACG
TTGGCGTCTGGAAGAAGTACAGCCTTACAGTGGCTGTGAAAACACTGAAGGAAGACACCATGGAGGTGGA
GGAGTTCCTGAAGGAAGCTGCAGTGATGAAGGAGATCAAGCATCCTAACTTAGTACAACTGCTAGGTGTG
TGTACCCTGGAGCCACCGTTTTACATTGTGACTGAATACATGCCGTATGGGAACCTGCTTGACTATCTCC
GGGAGTGCAGCCGAGAGGAGGTGACCGCCGTCGTGTTACTTTACATGGCCACCCAGATCTCCTCTGCCAT
GGAGTACTTGGAGAAGAAGAACTTCATCCATAGAGATCTTGCTGCCCGGAACTGCCTAGTGGGCGAGAAC
CATGTGGTGAAAGTGGCCGACTTTGGTTTAAGTAGACTGATGACTGGAGATACCTACACTGCTCATGCTG
GAGCCAAATTTCCTATTAAATGGACAGCACCCGAGAGTCTGGCCTACAATACCTTTTCAATTAAATCTGA
CGTTTGGGCGTTTGGAGTACTGTTGTGGGAAATTGCTACATATGGAATGTCACCATATCCAGGTATTGAC
CTATCTCAAGTCTATGACCTACTGGAAAAAGGATATCGAATGGAACAGCCTGAGGGATGCCCCCCTAAAG
TGTATGAACTTATGAGAGCATGCTGGAAGTGGAGCCCTGCTGACAGGCCCTCTTTTGCTGAAACCCATCA
AGCTTTTGAAACAATGTTCCATGACTCCAGCATCTCTGAAGAGGTAGCTGAGGAGCTTGGGAGAACGGCC
TCCTCCTCCTCTGTGGTTCCATACCTGCCTCGGTTACCGCTGCTTCCTTCCAAGACGAGGACCCTGAGGA
AGCAGGGGGAGAACAAAGAGAACCTAGATGGGGGCCTTGATGCCGCCGAGAGCCTGGCCTCCAGCTCAGC
ACCAGCAGGGTTCATTAGAAGCACACAGGCCTCCAGTGGGTCCCCAGCTCTGCCTCGAAAGCAAAGAGAT
AAGTCGCCCAGCAGCCTCTTAGAAGATGCCAAAGAGACATGCTTTACCAGGGATAGGAAGGGGGGCTTCT
TCAGCTCCTTCATGAAAAAGAGGAACGCCCCCACGCCCCCGAAGCGCAGCAGCTCCTTTCGAGAAATGGA
GAATCAGCCCCACAAGAAATATGAACTCACGGGTAACTTCTCACCTGTTGCTTCTCTACAGCATGCTGAT
GGGTTCTCTGTCGCTCCCAGCCAGCAAGAGCCGAATCTGGTGCCAGCCAAGTGCTATGGGGGGAGCTTTG
CACAGAGGAACCTCTGTGCTGATGATGACAGTGGTGGGGGTGGGGGCAGTGGCACTGCTGGGGGCGGGTG
GTCTGGTATCACAGGCTTCTTTACACCTCGATTAATCAAAAAGACACTGGGCTTGCGAGCAGGTAAGCCC
ACAGCCAGTGATGACACTTCGAAGCCTTTTCCAAGGTCCAACTCTACATCTTCCATGTCCTCAGGGCTTC
CAGAGCAGGATAGGATGGCAATGACCCTTCCCAGGAACTGCCAGAGGTCCAAACTCCAGCTGGAAAGGAC
AGTGTCCACCTCTTCTCAACCAGAAGAGAATGTGGACAGGGCTAATGACATGCTTCCAAAAAAATCTGAG
GAAGGTGCTGCTCCAGCCAGGGAGAGACCAAAAGCCAAACTATTGCCCAGAGGAGCCACAGCTCTTCCCT
TGAGAGCCCCTGATCCAGCCATCACAGAGAGTGACTCTCCGGGGGTAGGGGTGGCTGGAGTGGCAGCTGC
CCCCAAAGGCAAGGAAAGGAATGGTGGGACGCGACTTGGAGTCGCTGGAGTCCCCGAGGATGGAGAGCAG
CTAGGCTGGTCTTCTCCAGCCAAGGCTGTAGCTGTCCTCCCAACCACTCACAACCACAAAGTGCCAGTCC
TTATCTCTCCCACTCTGAAACACACTCCAGCTGATGTGCAGCTCATTGGCACAGACTCTCAGGGGAACAA
ATTCAAGCTCTTATCTGAGCATCAGGTCACATCCTCTGGAGACAAGGACCGACCCCGTCGGGTAAAACCA
AAGTGTGCCCCACCCCCCCCACCAGTGATGAGACTACTGCAGCATCCGTCCACATGCTCAGACCCCGAGG
AAGAGCCGACTGCCCCACCTGCAGGACAGCACACTCCAGAGACCCAGGAGGGAGGAAAAAAGGCAGCTCC
AGGCCCAATGCCCAGTAGTGGGAAACCTGGGAGGCCAGTCATGCCTCCACCTCAAGTGCCTTTGCCCACA
TCTTCCATCTCACCGGCCAAAATGGCCAATGGCACAGCAGGTACTAAGGTGGCCCTGAGGAAAACCAAAC
AGGCAGCTGAGAAAATCTCAGCTGACAAAATCAGCAAAGAGGCCCTGCTGGAGTGTGCCGACCTACTGTC
CAGTGCAATCACGGAACCTGTGCCCAACAGCCAACTGGTGGACACTGGGCACCAGCTGCTCGACTACTGC
TCAGGGTATGTGGACAGCATCCCTCAGACTCGCAACAAGTTTGCCTTCCGAGAGGCTGTGAGCAAACTGG
AACTTAGCTTACAGGAGCTGCAGGTGTCTTCCACAGCTGCTGGTGTGCCTGGGACAAACCCCGTCCTTAA
TAACTTATTGTCGTGTGTACAGGAAATTAGCGATGTGGTGCAGAGGTAG

Translation (1182 aa):
MGQQVGRVGEAPGLQQPQPRGIRGSSAARPSGRRRDPAGRTADAGFNVFTQHDHFASCVEDGFEGDKTGG
SSPEVLHRPFGCDAESQALNEAIRWSSKENLLGATESDPNLFVALYDFVASGDNTLSITKGEKLRVLGYN
QNGEWSEVRSKNGQGWVPSNYITPVNSLEKHSWYHGPVSRSAAEYLLSSLINGSFLVRESESSPGQLSIS
LRYEGRVYHYRINTTTDSKVYVTAESRFSTLAELVHHHSTVADGLVTTLHYPAPKCNKPTVYGVSPIHDK
WEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV
CTLEPPFYIVTEYMPYGNLLDYLRECSREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN
HVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID
LSQVYDLLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFETMFHDSSISEEVAEELGRTA
SSSSVVPYLPRLPLLPSKTRTLRKQGENKENLDGGLDAAESLASSSAPAGFIRSTQASSGSPALPRKQRD
KSPSSLLEDAKETCFTRDRKGGFFSSFMKKRNAPTPPKRSSSFREMENQPHKKYELTGNFSPVASLQHAD
GFSVAPSQQEPNLVPAKCYGGSFAQRNLCADDDSGGGGGSGTAGGGWSGITGFFTPRLIKKTLGLRAGKP
TASDDTSKPFPRSNSTSSMSSGLPEQDRMAMTLPRNCQRSKLQLERTVSTSSQPEENVDRANDMLPKKSE
EGAAPARERPKAKLLPRGATALPLRAPDPAITESDSPGVGVAGVAAAPKGKERNGGTRLGVAGVPEDGEQ
LGWSSPAKAVAVLPTTHNHKVPVLISPTLKHTPADVQLIGTDSQGNKFKLLSEHQVTSSGDKDRPRRVKP
KCAPPPPPVMRLLQHPSTCSDPEEEPTAPPAGQHTPETQEGGKKAAPGPMPSSGKPGRPVMPPPQVPLPT
SSISPAKMANGTAGTKVALRKTKQAAEKISADKISKEALLECADLLSSAITEPVPNSQLVDTGHQLLDYC
SGYVDSIPQTRNKFAFREAVSKLELSLQELQVSSTAAGVPGTNPVLNNLLSCVQEISDVVQR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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