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Report for CCDS24033.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24033.1 Public Mus musculus 10 Amh 23 108 98 CCDS HistoryNCBI Gene:11705Re-query CCDS DB by CCDS ID:24033.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24033.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000036016.5 ENSMUSP00000043153.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000036016.5Link to Ensembl Protein Viewer:ENSMUSP00000043153.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000036016Re-query CCDS DB by Protein ID:ENSMUSP00000043153
Original member Current member NCBI NM_007445.3 NP_031471.2 Accepted alive Link to Nucleotide Sequence:NM_007445.3Link to Protein Sequence:NP_031471.2Re-query CCDS DB by Nucleotide ID:NM_007445Re-query CCDS DB by Protein ID:NP_031471Link to BLAST:NP_031471.2

Chromosomal Locations for CCDS 24033.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 80805248 80805650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80806024 80806166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80806344 80806452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80806540 80806699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80806799 80807648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1665 nt):
ATGCAGGGGCCACACCTCTCTCCACTGGTACTGCTGCTAGCGACTATGGGGGCTGTGTTACAGCCTGAGG
CGGTTGAAAACCTGGCCACCAATACCAGGGGCCTCATCTTCCTTGAAGATGAGCTCTGGCCCCCCAGCAG
CCCCCCTGAACCTTTGTGCCTGGTGACAGTGAGAGGAGAGGGGAACACAAGCAGAGCTTCCCTGAGGGTG
GTGGGGGGTCTGAACAGCTATGAGTATGCCTTCCTGGAGGCTGTCCAGGAGTCTCGCTGGGGACCCCAAG
ACCTGGCCACCTTCGGAGTCTGCAGCACTGACTCCCAGGCTACCCTGCCTGCCCTGCAGCGCCTTGGGGC
CTGGCTAGGGGAGACTGGAGAACAGCAGTTGCTAGTCCTACATCTGGCTGAAGTGATATGGGAGCCCGAG
CTCTTGCTGAAGTTCCAAGAGCCTCCACCTGGGGGAGCCAGCCGCTGGGAGCAGGCCCTGTTAGTGCTAT
ACCCTGGACCAGGCCCCCAGGTCACAGTCACAGGGACTGGACTGCGGGGCACACAGAACCTCTGCCCTAC
TCGGGACACCCGCTATTTGGTGCTAACCGTGGACTTCCCAGCGGGGGCCTGGAGCGGCTCGGGCCTCATC
TTAACCCTTCAACCAAGCAGAGAAGGTGCCACCCTGAGCATCGATCAGCTGCAAGCCTTTCTATTTGGCT
CTGATTCCCGCTGTTTCACGCGGATGACTCCCACCCTGGTGGTGCTGCCACCCGCCGAGCCGTCACCGCA
GCCAGCACACGGCCAGCTGGACACCATGCCTTTCCCGCAGCCTGGACTGTCCCTGGAGCCTGAGGCCCTG
CCACACAGCGCCGACCCCTTCCTAGAGACCCTCACTCGCTTGGTTCGTGCTCTGCGGGGACCTCTGACCC
AGGCTTCGAACACGCAACTGGCCCTGGACCCTGGTGCGCTGGCCAGCTTCCCACAGGGCCTGGTCAACCT
GTCAGACCCCGCAGCACTGGGACGCCTGCTCGACTGGGAGGAACCCCTATTACTGCTGCTGTCACCCGCT
GCGGCCACGGAGAGGGAACCTATGCCGCTGCACGGCCCCGCTTCTGCTCCCTGGGCAGCGGGCCTGCAAC
GCAGGGTGGCAGTGGAGCTGCAGGCGGCAGCCTCAGAGCTGCGGGACCTCCCGGGTCTGCCACCCACAGC
TCCCCCGCTGCTGGCGCGCCTGCTAGCGCTGTGTCCCAACGACTCCCGCAGCTCCGGGGACCCGCTGCGC
GCGCTGCTGCTGCTAAAGGCGCTGCAGGGCTTACGTGCCGAGTGGCATGGGCGGGAAGGGCGTGGGAGAA
CGGGGCGCAGCGCGGGGACAGGGACAGACGGGCCTTGCGCGCTGCGCGAGCTGAGTGTAGATCTGCGCGC
GGAGCGTTCAGTGCTCATCCCGGAGACCTACCAAGCCAACAACTGCCAAGGCGCCTGCGCGTGGCCGCAG
TCTGACCGTAATCCGCGCTACGGGAACCACGTGGTGCTGCTGCTAAAAATGCAGGCTCGCGGGGCTGCCC
TGGGCCGCCTGCCCTGCTGCGTGCCCACTGCCTACGCGGGCAAGCTGCTCATCAGCCTGTCCGAGGAGCG
CATCAGCGCGCACCACGTGCCCAACATGGTAGCCACCGAGTGCGGCTGCCGGTGA

Translation (554 aa):
MQGPHLSPLVLLLATMGAVLQPEAVENLATNTRGLIFLEDELWPPSSPPEPLCLVTVRGEGNTSRASLRV
VGGLNSYEYAFLEAVQESRWGPQDLATFGVCSTDSQATLPALQRLGAWLGETGEQQLLVLHLAEVIWEPE
LLLKFQEPPPGGASRWEQALLVLYPGPGPQVTVTGTGLRGTQNLCPTRDTRYLVLTVDFPAGAWSGSGLI
LTLQPSREGATLSIDQLQAFLFGSDSRCFTRMTPTLVVLPPAEPSPQPAHGQLDTMPFPQPGLSLEPEAL
PHSADPFLETLTRLVRALRGPLTQASNTQLALDPGALASFPQGLVNLSDPAALGRLLDWEEPLLLLLSPA
AATEREPMPLHGPASAPWAAGLQRRVAVELQAAASELRDLPGLPPTAPPLLARLLALCPNDSRSSGDPLR
ALLLLKALQGLRAEWHGREGRGRTGRSAGTGTDGPCALRELSVDLRAERSVLIPETYQANNCQGACAWPQ
SDRNPRYGNHVVLLLKMQARGAALGRLPCCVPTAYAGKLLISLSEERISAHHVPNMVATECGCR


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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