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Report for CCDS22886.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22886.1 Public Mus musculus 9 Angptl6 23 108 98 CCDS HistoryNCBI Gene:70726Re-query CCDS DB by CCDS ID:22886.1Re-query CCDS DB by GeneID:70726See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 22886.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000043726.7 ENSMUSP00000035784.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000043726.7Link to Ensembl Protein Viewer:ENSMUSP00000035784.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000043726Re-query CCDS DB by Protein ID:ENSMUSP00000035784
Original member Current member NCBI NM_145154.2 NP_660136.1 Accepted alive Link to Nucleotide Sequence:NM_145154.2Link to Protein Sequence:NP_660136.1Re-query CCDS DB by Nucleotide ID:NM_145154Re-query CCDS DB by Protein ID:NP_660136Link to BLAST:NP_660136.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_660136.1 457 Q8R0Z6 457 100% 0 0

Chromosomal Locations for CCDS 22886.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 20873882 20874072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 20875166 20875436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 20875514 20875701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 20876392 20876569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 20878049 20878594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1374 nt):
ATGGGGACCGCCAGGCTACGCAAGCTGCAACTGCTGCTTCTGCTGGGCGCTTGGAGGGCGCTCGGAGGTG
CCGCGCGTTGCCGCGTCACCCTAGTTTTGTCCCCGCAGAAGGCAACTAGCGCCGTCTGCAGGAGCTCAGA
AGCCACCCAAGACAGCGAACTGGCCACGCTGCGCATGCGCCTGGGTCGCCACGAGGAGCTGCTGCGCGCG
CTGCAAAGGCGTGCGGCGGAGGGTGGTGCGCTCGCGGACGAGGTGCGCGCACTGCGCGAGCACAGTCTCA
CCCTGAACACGCGCCTGGGCCAGCTGCGCGCGCAATTGCAGCAGGAGGCGAGGGCGGAGCCTGACCTGGG
GGCGGAGCCTGCTGCTGCACTTGGTTTGCTAGCCGAGCGCGCGCTGGACGCTGAGGCCGAAGCGCGCCGG
ACGACGGCACGCCTGCAGCAGCTGGACGCACAGCTCCGTGAGCATGCGCAGCTCATGAGCCAGCATAGCA
GCCTCCTCGGCCGCCTGCAACGCGCGTGCGCGGGCCCGGAACGGGGACAGCAGCAGGTCCTGCCACTGCC
CCTGGCGCCTCTGGTGCCTCTGAGCCTCGTGGGCAGTGCCAGCAACACCAGCAGGAGGCTGGACCAAACT
CCAGAGCACCAGAGAGAGCAGAGCTTGAGACAGCAGGGGCCTCCATCTTCTCTGCTGCCCACAGGGCACC
TTGCTGTCCCCACAAGGCCAGTGGGCCCATGGAGGGATTGTGCAGAGGCTCACGGGGCAGGTCACTGGCA
GAGTGGAGTGTATGACCTGCGGCTGGGCCGTCGTGTAGTAGCCGTGTGGTGTGAACAGCAGCAGGAAGGT
GGAGGCTGGACTGTCATCCAGAGACGGCAGGACGGCTCTGTCAACTTCTTCACCAACTGGCAGCACTACA
AGGCGGGCTTTGGGCGTCCAGAAGGAGAATACTGGCTGGGCCTGGAACCTGTGCATCAGGTGACAAGCCG
TGGGGACCACGAGCTGCTGATACTCCTAGAGGACTGGGGGGGCCGTGCAGCACGCGCCCACTACGACAGC
TTCTCCTTGGAGCCTGAGAGTGACCACTACCGTCTGCGGCTTGGCCAGTACCACGGCGATGCCGGAGACT
CCCTCTCTTGGCACAATGACAAACCTTTCAGCACTGTGGATAGGGACAGAGACTCATATTCTGGTAACTG
TGCCCTGTACCATCGTGGGGGCTGGTGGTACCATGCCTGTGCCCACTCTAACCTCAATGGAGTATGGTAT
CATGGAGGTCATTACCGGAGCCGATACCAGGACGGGGTCTACTGGGCCGAGTTCCGTGGTGGGGCGTACT
CTCTGAAGAAAGCTGTTATGTTGACCCGGCTTGTGCGCTTGTGA

Translation (457 aa):
MGTARLRKLQLLLLLGAWRALGGAARCRVTLVLSPQKATSAVCRSSEATQDSELATLRMRLGRHEELLRA
LQRRAAEGGALADEVRALREHSLTLNTRLGQLRAQLQQEARAEPDLGAEPAAALGLLAERALDAEAEARR
TTARLQQLDAQLREHAQLMSQHSSLLGRLQRACAGPERGQQQVLPLPLAPLVPLSLVGSASNTSRRLDQT
PEHQREQSLRQQGPPSSLLPTGHLAVPTRPVGPWRDCAEAHGAGHWQSGVYDLRLGRRVVAVWCEQQQEG
GGWTVIQRRQDGSVNFFTNWQHYKAGFGRPEGEYWLGLEPVHQVTSRGDHELLILLEDWGGRAARAHYDS
FSLEPESDHYRLRLGQYHGDAGDSLSWHNDKPFSTVDRDRDSYSGNCALYHRGGWWYHACAHSNLNGVWY
HGGHYRSRYQDGVYWAEFRGGAYSLKKAVMLTRLVRL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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