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Report for CCDS36774.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36774.1 Public Mus musculus 13 Rgs7bp 23 108 98 CCDS HistoryNCBI Gene:52882Re-query CCDS DB by CCDS ID:36774.1Re-query CCDS DB by GeneID:52882See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36774.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000063551.6 ENSMUSP00000066614.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000063551.6Link to Ensembl Protein Viewer:ENSMUSP00000066614.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000063551Re-query CCDS DB by Protein ID:ENSMUSP00000066614
Original member Current member NCBI NM_029879.2 NP_084155.2 Accepted alive Link to Nucleotide Sequence:NM_029879.2Link to Protein Sequence:NP_084155.2Re-query CCDS DB by Nucleotide ID:NM_029879Re-query CCDS DB by Protein ID:NP_084155Link to BLAST:NP_084155.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_084155.2 257 Q8BQP9 257 100% 0 0

Chromosomal Locations for CCDS 36774.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 104951491 104951582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 104964084 104964154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 104966981 104967128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 104982866 104982996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 105052958 105053124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 105054050 105054214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (774 nt):
ATGAGTTCTGCACCGAATGGGCGCAAAAAGCGCCCCAGCCGGTCCACCCGCTCCTCGATCTTCCAGATCA
GCAAACCTCCGCTGCAGAGCGGGGATTGGGAGCGCAGGGGCAGCGGCTCCGAAAGCGCCCACAAAACCCA
ACGAGCCCTGGACGACTGCAAGATGCTTGTCCAAGAGTTCAACACGCAAGTGGCCCTGTACCGAGAGTTG
GTCATTTCTATTGGGGACGTCTCAGTCAGCTGCCCCTCTCTGCGAGCTGAAATGCACAAGACAAGAACCA
AAGGCTGTGAAATGGCCCGTCAGGCACACCAAAAGCTGGCTGCCATCTCAGGCCCGGAAGATGGTGAGAT
CCATCCCGAAATCTGCCGGCTTTACATCCAGCTGCAGTGTTGCCTAGAGATGTACACCACAGAGATGCTG
AAGTCCATTTGTCTGCTGGGGTCTCTTCAGTTTCATCGAAAAGGAAAAGAAGCTAGTGGGGGAGCGAAGA
ATTTGGACAGCAAAATTGAGGAGAATGCTGAAACACCTGCCCTGGAGGACTCCTTGTCATCCCCTCTCGA
GAGCCAGCAGCAGTGCTGGCAGGTCGCCACAGATATTGAAAACACTGAAAGAGACATGCGAGAAATGAAA
AACCTTCTTAGCAAACTCAGGGAAACGATGCCTTTACCACTGAAAAATCAAGATGACAGCAGCCTTCTGA
ATCTAACGCCCTACCCCATGGTCAGAAGACGGAAGAGAAGGTTCTTCGGCTTATGTTGTCTTGTCTCAAG
CTAG

Translation (257 aa):
MSSAPNGRKKRPSRSTRSSIFQISKPPLQSGDWERRGSGSESAHKTQRALDDCKMLVQEFNTQVALYREL
VISIGDVSVSCPSLRAEMHKTRTKGCEMARQAHQKLAAISGPEDGEIHPEICRLYIQLQCCLEMYTTEML
KSICLLGSLQFHRKGKEASGGAKNLDSKIEENAETPALEDSLSSPLESQQQCWQVATDIENTERDMREMK
NLLSKLRETMPLPLKNQDDSSLLNLTPYPMVRRRKRRFFGLCCLVSS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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