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Report for CCDS40326.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40326.1 Public Mus musculus 8 Adam39 23 108 98 CCDS HistoryNCBI Gene:546055Re-query CCDS DB by CCDS ID:40326.1Re-query CCDS DB by GeneID:546055See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40326.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000066814.6 ENSMUSP00000065783.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000066814.6Link to Ensembl Protein Viewer:ENSMUSP00000065783.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000066814Re-query CCDS DB by Protein ID:ENSMUSP00000065783
Original member Current member NCBI NM_001025380.3 NP_001020551.3 Accepted alive Link to Nucleotide Sequence:NM_001025380.3Link to Protein Sequence:NP_001020551.3Re-query CCDS DB by Nucleotide ID:NM_001025380Re-query CCDS DB by Protein ID:NP_001020551Link to BLAST:NP_001020551.3

Chromosomal Locations for CCDS 40326.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 40824574 40826844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2271 nt):
ATGCAGACAACACAAAGGGCATCCTCCTTTGCTGCCACAGAGGACAACATAGCTATGGATAAGGCTGTGG
TATACACAAGGATACCTCATCTGTACCTCTGGCTAGAGATATTGAATATTCTTTCATCATGGCTCTTGAC
TGGGTATGCTCAGCACACCAGCCTCCCAGAAGTAGTGATACCCTTACGGGTCACAGGCAACAGACCAATG
TGGGCTATGGGATGGCTGACCTATAGCCTGCATTTTGGGGGCCAGAAACATTTTATTCACATAAAGGCCA
AGAAGTTCTTGGTTTCTAGACTCTTCTCTGTATTCACCTACACTAAGCAAGGTGCTCTGCACAAGGACCA
GCCTTATGTCCAGAATGATTGCTACTACCATGGCCATATGGATGGAGACCCAGAGTCTATGGTTGCTATT
ACCACCTGTTATGGAGGCTTTCAAGGAATATTACAGATAAATGGCACAGTCTATGAAATCAAGCCCAAGA
ACCTTTCTTCCACATTTGAACATTTGGTTCACAAGATGGACAGTGAGGAGACAGAATTATACCCCATGAG
ATGTGCATTGACAGAAGAGATAGCAAAGCAAATGAAACTTCAGCAGAATGAGAACCCCACTCTGATGCAA
AGCCACTATGAAGGATGGTGGACCCACAGGAGTTTTCTTGACCTGGCATTGGTTGTTGACTGTGAGCGAG
TTCATTATCATAACAATAACACATCACATGTCTTAGTGGAAGTATTCACCATTGTCAATATAATAAATAA
TATTTATGAGACACTGGATGTTGAGCTAGTTTTACTTGGAGTTGAGATGTGGAATGAAAAAAACCACGTG
CAGGGACGTAACATAAACGAATTCCTAGTTGAATTTTGTGATTGGAAGGCTCGCAGCCTTAATTTTCGAA
TTCCAAATGACATTGCACATATTTTTGTGAATCTTGATTTTCAAATTTACCTTGGTGTGGCCTATGTTGG
AGGTGTCTGTTTGCCATCTTATAACTGTGGAGTTGATTGTCTGTTAGGAGGTAATCTTTTTTATTTTGGA
CATATTATAGCACATGAGATTGGTCATAATCTGGGTATGGAGCATGATAGCAGCTCATGTACATGTGGAA
GAAATGTTTGCTTAATGGCTCCAGCAGATAATGGTATCTCGAAGTTCAGTAACTGTAGTTATTCTTACTT
CTGGACTAAGTACCCTACTGCCAAGTGTATGCACAAGGAAAAGAAGTCAATAGGCATCCTCCGAGGCAAG
CTCTGTGGGGATGGAGTGGTTGACGATGGAGAACAGTGTGATTGTGGATCTGCAAAAAACTGTGCAGACG
ATCCATGTTGTAAGCGCAGCTGCACCCTCAAAGATGGCGCTGCCTGTGCTTTTGGGCTTTGCTGCAAATA
TTGCCAGATCATGGAGGCAGGCACAGTTTGCCGAAAAAGGGACAATGAATGTGATCTTCCAGAATGGTGC
AACGGACATTCACATAAGTGTCCTAATGACGTTTATTTGCTTGATGGGAGTCCCTGTAGAGATGGTGGCT
ACTGCTATGAGAAGAGATGTAATAATCGAGATAAACAGTGTAAGCAAATCTTCGGCAAAGAAGCCAGGAG
TGCAGATCACAGTTGCTACAGAGAACTCAACACCCAAGGTGACCGTTTTGGCAACTGTGGTATGATCAGA
GATGCATACTTAAGATGTCATGACCCAGACATCCTCTGTGGCAGAGTTCAATGTGAGAACGTAACACGCA
TTCCATTTTTGAGGGACCATTCCACTGTACACTGGACTCACCTCAATGGTGTCACCTGTTGGGGGACTGA
CTACCATTTTGGGATGACAATCCCTGACATTGGTATTGTGAAAGATGGCACAGACTGTGGTCCAGAGCAT
GTGTGTATTAATAAGAAGTGTGTCAGTAAGCCAATTTGGACAAGTCAGTGTTCACCCACTACATGCAGCA
TGAAAGGTGTGTGCAACAATTTACACCACTGCCACTGCAACCGGGGGTGGGACCCACCACATTGCCTGAA
AAGTGGCCTTGGAGGGAGTATTGACAGTGGCCCTCCGAACTATAATGAAAAGAAACACAAGAAAAGTATT
GGGCTAGTGAGTCTTTTTTGGATTCTTTTTGCTTGTTTTTCCATATTGTTCATTCTGTTCCTTTTTTTCT
TGAGGAGTTATATAGAACTACCTATGAGTGAAGAACCCAAAGTTCCCACCCCAGAAAAGAAAGAAGATGG
CAATGATGTAATGAACACTGAAAAAGAATAA

Translation (756 aa):
MQTTQRASSFAATEDNIAMDKAVVYTRIPHLYLWLEILNILSSWLLTGYAQHTSLPEVVIPLRVTGNRPM
WAMGWLTYSLHFGGQKHFIHIKAKKFLVSRLFSVFTYTKQGALHKDQPYVQNDCYYHGHMDGDPESMVAI
TTCYGGFQGILQINGTVYEIKPKNLSSTFEHLVHKMDSEETELYPMRCALTEEIAKQMKLQQNENPTLMQ
SHYEGWWTHRSFLDLALVVDCERVHYHNNNTSHVLVEVFTIVNIINNIYETLDVELVLLGVEMWNEKNHV
QGRNINEFLVEFCDWKARSLNFRIPNDIAHIFVNLDFQIYLGVAYVGGVCLPSYNCGVDCLLGGNLFYFG
HIIAHEIGHNLGMEHDSSSCTCGRNVCLMAPADNGISKFSNCSYSYFWTKYPTAKCMHKEKKSIGILRGK
LCGDGVVDDGEQCDCGSAKNCADDPCCKRSCTLKDGAACAFGLCCKYCQIMEAGTVCRKRDNECDLPEWC
NGHSHKCPNDVYLLDGSPCRDGGYCYEKRCNNRDKQCKQIFGKEARSADHSCYRELNTQGDRFGNCGMIR
DAYLRCHDPDILCGRVQCENVTRIPFLRDHSTVHWTHLNGVTCWGTDYHFGMTIPDIGIVKDGTDCGPEH
VCINKKCVSKPIWTSQCSPTTCSMKGVCNNLHHCHCNRGWDPPHCLKSGLGGSIDSGPPNYNEKKHKKSI
GLVSLFWILFACFSILFILFLFFLRSYIELPMSEEPKVPTPEKKEDGNDVMNTEKE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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