NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS3031.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3031.1 Public Homo sapiens 3 ZNF148 24 110 108 CCDS HistoryNCBI Gene:7707Re-query CCDS DB by CCDS ID:3031.1Re-query CCDS DB by GeneID:7707See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3031.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360647.9 ENSP00000353863.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000360647.9Link to Ensembl Protein Viewer:ENSP00000353863.4Re-query CCDS DB by Nucleotide ID:ENST00000360647Re-query CCDS DB by Protein ID:ENSP00000353863
Original member Current member EBI ENST00000492394.5 ENSP00000419322.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000492394.5Link to Ensembl Protein Viewer:ENSP00000419322.1Re-query CCDS DB by Nucleotide ID:ENST00000492394Re-query CCDS DB by Protein ID:ENSP00000419322
Original member Current member EBI ENST00000471196.2 ENSP00000420038.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000471196.2Link to Ensembl Protein Viewer:ENSP00000420038.2Re-query CCDS DB by Nucleotide ID:ENST00000471196Re-query CCDS DB by Protein ID:ENSP00000420038
Original member Current member EBI ENST00000484491.5 ENSP00000420335.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000484491.5Link to Ensembl Protein Viewer:ENSP00000420335.1Re-query CCDS DB by Nucleotide ID:ENST00000484491Re-query CCDS DB by Protein ID:ENSP00000420335
Original member Current member EBI ENST00000485866.5 ENSP00000420448.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000485866.5Link to Ensembl Protein Viewer:ENSP00000420448.1Re-query CCDS DB by Nucleotide ID:ENST00000485866Re-query CCDS DB by Protein ID:ENSP00000420448
Original member Current member EBI ENST00000700044.1 ENSP00000514760.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000700044.1Link to Ensembl Protein Viewer:ENSP00000514760.1Re-query CCDS DB by Nucleotide ID:ENST00000700044Re-query CCDS DB by Protein ID:ENSP00000514760
Original member Current member NCBI NM_001348424.1 NP_001335353.1 Accepted alive Link to Nucleotide Sequence:NM_001348424.1Link to Protein Sequence:NP_001335353.1Re-query CCDS DB by Nucleotide ID:NM_001348424Re-query CCDS DB by Protein ID:NP_001335353Link to BLAST:NP_001335353.1
Original member Current member NCBI NM_001348425.2 NP_001335354.1 Accepted alive Link to Nucleotide Sequence:NM_001348425.2Link to Protein Sequence:NP_001335354.1Re-query CCDS DB by Nucleotide ID:NM_001348425Re-query CCDS DB by Protein ID:NP_001335354Link to BLAST:NP_001335354.1
Original member Current member NCBI NM_001348426.2 NP_001335355.1 Accepted alive Link to Nucleotide Sequence:NM_001348426.2Link to Protein Sequence:NP_001335355.1Re-query CCDS DB by Nucleotide ID:NM_001348426Re-query CCDS DB by Protein ID:NP_001335355Link to BLAST:NP_001335355.1
Original member Current member NCBI NM_001348427.2 NP_001335356.1 Accepted alive Link to Nucleotide Sequence:NM_001348427.2Link to Protein Sequence:NP_001335356.1Re-query CCDS DB by Nucleotide ID:NM_001348427Re-query CCDS DB by Protein ID:NP_001335356Link to BLAST:NP_001335356.1
Original member Current member NCBI NM_001348428.2 NP_001335357.1 Accepted alive Link to Nucleotide Sequence:NM_001348428.2Link to Protein Sequence:NP_001335357.1Re-query CCDS DB by Nucleotide ID:NM_001348428Re-query CCDS DB by Protein ID:NP_001335357Link to BLAST:NP_001335357.1
Original member Current member NCBI NM_001348429.2 NP_001335358.1 Accepted alive Link to Nucleotide Sequence:NM_001348429.2Link to Protein Sequence:NP_001335358.1Re-query CCDS DB by Nucleotide ID:NM_001348429Re-query CCDS DB by Protein ID:NP_001335358Link to BLAST:NP_001335358.1
Original member Current member NCBI NM_001348430.2 NP_001335359.1 Accepted alive Link to Nucleotide Sequence:NM_001348430.2Link to Protein Sequence:NP_001335359.1Re-query CCDS DB by Nucleotide ID:NM_001348430Re-query CCDS DB by Protein ID:NP_001335359Link to BLAST:NP_001335359.1
Original member Current member NCBI NM_001348431.2 NP_001335360.1 Accepted alive Link to Nucleotide Sequence:NM_001348431.2Link to Protein Sequence:NP_001335360.1Re-query CCDS DB by Nucleotide ID:NM_001348431Re-query CCDS DB by Protein ID:NP_001335360Link to BLAST:NP_001335360.1
Original member Current member NCBI NM_001348432.2 NP_001335361.1 Accepted alive Link to Nucleotide Sequence:NM_001348432.2Link to Protein Sequence:NP_001335361.1Re-query CCDS DB by Nucleotide ID:NM_001348432Re-query CCDS DB by Protein ID:NP_001335361Link to BLAST:NP_001335361.1
Original member Current member NCBI NM_001348433.2 NP_001335362.1 Accepted alive Link to Nucleotide Sequence:NM_001348433.2Link to Protein Sequence:NP_001335362.1Re-query CCDS DB by Nucleotide ID:NM_001348433Re-query CCDS DB by Protein ID:NP_001335362Link to BLAST:NP_001335362.1
Original member Current member NCBI NM_021964.3 NP_068799.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021964.3Link to Protein Sequence:NP_068799.2Re-query CCDS DB by Nucleotide ID:NM_021964Re-query CCDS DB by Protein ID:NP_068799Link to BLAST:NP_068799.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001335353.1 794 Q9UQR1-1 794 100% 0 0
NP_001335354.1 794 Q9UQR1-1 794 100% 0 0
NP_001335355.1 794 Q9UQR1-1 794 100% 0 0
NP_001335356.1 794 Q9UQR1-1 794 100% 0 0
NP_001335357.1 794 Q9UQR1-1 794 100% 0 0
NP_001335358.1 794 Q9UQR1-1 794 100% 0 0
NP_001335359.1 794 Q9UQR1-1 794 100% 0 0
NP_001335360.1 794 Q9UQR1-1 794 100% 0 0
NP_001335361.1 794 Q9UQR1-1 794 100% 0 0
NP_001335362.1 794 Q9UQR1-1 794 100% 0 0
NP_068799.2 794 Q9UQR1-1 794 100% 0 0

Chromosomal Locations for CCDS 3031.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 125232341 125233939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 125234211 125234329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 125277726 125277809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 125279124 125279247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 125288103 125288228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 125313308 125313640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2385 nt):
ATGAACATTGACGACAAACTGGAAGGATTGTTTCTTAAATGTGGCGGCATAGACGAAATGCAGTCTTCCA
GGACAATGGTTGTAATGGGTGGAGTGTCTGGCCAGTCTACTGTGTCTGGAGAGCTACAGGATTCAGTACT
TCAAGATCGAAGTATGCCTCACCAGGAGATCCTTGCTGCAGATGAAGTGTTACAAGAAAGTGAAATGAGA
CAACAGGATATGATATCACATGATGAACTCATGGTCCATGAGGAGACAGTGAAAAATGATGAAGAGCAGA
TGGAAACACATGAAAGACTTCCTCAAGGACTACAGTATGCACTTAATGTCCCTATAAGCGTAAAGCAGGA
AATTACTTTTACTGATGTATCTGAGCAACTGATGAGAGACAAAAAACAAATCAGAGAGCCAGTAGACTTA
CAGAAAAAGAAGAAGCGGAAACAACGTTCTCCCGCAAAAATCCTTACAATAAATGAGGATGGATCACTTG
GTTTGAAAACCCCTAAATCTCACGTTTGTGAGCACTGCAATGCTGCCTTTAGAACGAACTATCACTTACA
GAGACATGTCTTCATTCATACAGGTGAAAAACCATTTCAATGTAGTCAATGTGACATGCGTTTCATACAG
AAGTACCTGCTTCAGAGACATGAGAAGATTCATACTGGTGAAAAACCATTTCGCTGTGATGAATGTGGTA
TGAGATTCATACAAAAATATCATATGGAAAGGCATAAGAGAACTCATAGTGGAGAAAAACCTTACCAGTG
TGAATACTGTTTACAGTATTTTTCCAGAACAGATCGTGTATTGAAACATAAACGTATGTGCCATGAAAAT
CATGACAAAAAACTAAATAGATGTGCCATCAAAGGTGGCCTTCTGACATCTGAGGAAGATTCTGGCTTTT
CTACATCACCAAAAGACAACTCACTGCCAAAAAAGAAAAGGCAGAAAACGGAGAAAAAATCATCTGGAAT
GGACAAAGAGAGTGCTTTGGACAAATCTGACCTGAAAAAAGACAAAAATGATTACTTGCCTCTTTATTCT
TCAAGTACTAAAGTAAAAGATGAGTATATGGTTGCAGAATATGCTGTTGAAATGCCACATTCGTCAGTTG
GGGGCTCGCATTTAGAAGATGCGTCAGGAGAAATACACCCACCTAAGTTAGTTCTCAAAAAAATTAATAG
TAAGAGAAGTCTGAAACAGCCACTGGAGCAAAATCAAACAATTTCACCTTTATCCACATATGAAGAGAGC
AAAGTTTCAAAGTATGCTTTTGAACTTGTGGATAAACAGGCTTTACTGGACTCAGAAGGCAATGCTGACA
TTGATCAGGTTGATAATTTGCAGGAGGGGCCCAGTAAACCTGTGCATAGTAGTACTAATTATGATGATGC
CATGCAGTTTTTGAAGAAGAAGCGGTATCTTCAAGCAGCAAGTAACAACAGCAGGGAATATGCGCTGAAT
GTGGGTACCATAGCTTCTCAGCCTTCTGTAACACAAGCAGCTGTGGCAAGTGTCATTGATGAAAGTACCA
CGGCATCCATATTAGAGTCACAGGCACTGAATGTGGAGATTAAGAGTAATCATGACAAAAATGTTATTCC
AGATGAGGTACTGCAGACTCTGTTGGATCATTATTCCCACAAAGCTAATGGACAGCATGAGATATCCTTC
AGTGTTGCAGATACTGAAGTGACTTCTAGCATATCAATAAATTCTTCAGAAGTACCAGAGGTCACCCCGT
CAGAGAATGTTGGATCAAGCTCCCAAGCATCCTCATCAGATAAAGCCAACATGTTGCAGGAATACTCCAA
GTTTCTGCAGCAGGCTTTGGACAGAACTAGCCAAAATGATGCCTATTTGAATAGCCCGAGCCTTAACTTT
GTGACTGATAACCAGACCCTCCCAAATCAGCCAGCATTCTCTTCCATAGACAAGCAGGTCTATGCCACCA
TGCCCATCAATAGCTTTCGATCAGGAATGAATTCTCCACTAAGAACAACTCCAGATAAGTCCCACTTTGG
ACTAATAGTTGGTGATTCACAGCACTCATTTCCCTTTTCAGGTGATGAGACAAACCATGCTTCTGCCACA
TCAACACAGGACTTTCTGGATCAAGTGACTTCTCAGAAGAAAGCTGAGGCCCAGCCTGTCCACCAAGCTT
ACCAAATGAGCTCCTTTGAACAGCCCTTCCGTGCTCCCTATCATGGATCAAGAGCTGGAATAGCTACTCA
ATTTAGCACTGCCAATGGACAGGTGAACCTTCGGGGACCAGGGACAAGTGCTGAATTTTCAGAATTTCCC
TTGGTGAATGTAAATGATAATAGAGCTGGGATGACATCTTCACCTGATGCCACAACTGGCCAGACTTTTG
GCTAA

Translation (794 aa):
MNIDDKLEGLFLKCGGIDEMQSSRTMVVMGGVSGQSTVSGELQDSVLQDRSMPHQEILAADEVLQESEMR
QQDMISHDELMVHEETVKNDEEQMETHERLPQGLQYALNVPISVKQEITFTDVSEQLMRDKKQIREPVDL
QKKKKRKQRSPAKILTINEDGSLGLKTPKSHVCEHCNAAFRTNYHLQRHVFIHTGEKPFQCSQCDMRFIQ
KYLLQRHEKIHTGEKPFRCDECGMRFIQKYHMERHKRTHSGEKPYQCEYCLQYFSRTDRVLKHKRMCHEN
HDKKLNRCAIKGGLLTSEEDSGFSTSPKDNSLPKKKRQKTEKKSSGMDKESALDKSDLKKDKNDYLPLYS
SSTKVKDEYMVAEYAVEMPHSSVGGSHLEDASGEIHPPKLVLKKINSKRSLKQPLEQNQTISPLSTYEES
KVSKYAFELVDKQALLDSEGNADIDQVDNLQEGPSKPVHSSTNYDDAMQFLKKKRYLQAASNNSREYALN
VGTIASQPSVTQAAVASVIDESTTASILESQALNVEIKSNHDKNVIPDEVLQTLLDHYSHKANGQHEISF
SVADTEVTSSISINSSEVPEVTPSENVGSSSQASSSDKANMLQEYSKFLQQALDRTSQNDAYLNSPSLNF
VTDNQTLPNQPAFSSIDKQVYATMPINSFRSGMNSPLRTTPDKSHFGLIVGDSQHSFPFSGDETNHASAT
STQDFLDQVTSQKKAEAQPVHQAYQMSSFEQPFRAPYHGSRAGIATQFSTANGQVNLRGPGTSAEFSEFP
LVNVNDNRAGMTSSPDATTGQTFG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH