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Report for CCDS58527.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58527.1 Public Homo sapiens 17 PRPSAP2 24 110 108 CCDS HistoryNCBI Gene:5636Re-query CCDS DB by CCDS ID:58527.1Re-query CCDS DB by GeneID:5636See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 58527.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000536323.5 ENSP00000443967.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000536323.5Link to Ensembl Protein Viewer:ENSP00000443967.1Re-query CCDS DB by Nucleotide ID:ENST00000536323Re-query CCDS DB by Protein ID:ENSP00000443967
Original member Current member EBI ENST00000610773.4 ENSP00000481322.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000610773.4Link to Ensembl Protein Viewer:ENSP00000481322.1Re-query CCDS DB by Nucleotide ID:ENST00000610773Re-query CCDS DB by Protein ID:ENSP00000481322
Original member Current member NCBI NM_001243941.1 NP_001230870.1 Accepted alive Link to Nucleotide Sequence:NM_001243941.1Link to Protein Sequence:NP_001230870.1Re-query CCDS DB by Nucleotide ID:NM_001243941Re-query CCDS DB by Protein ID:NP_001230870Link to BLAST:NP_001230870.1
Original member Current member NCBI NM_001243942.1 NP_001230871.1 Accepted alive Link to Nucleotide Sequence:NM_001243942.1Link to Protein Sequence:NP_001230871.1Re-query CCDS DB by Nucleotide ID:NM_001243942Re-query CCDS DB by Protein ID:NP_001230871Link to BLAST:NP_001230871.1
Original member Current member NCBI NM_001353100.2 NP_001340029.1 Accepted alive Link to Nucleotide Sequence:NM_001353100.2Link to Protein Sequence:NP_001340029.1Re-query CCDS DB by Nucleotide ID:NM_001353100Re-query CCDS DB by Protein ID:NP_001340029Link to BLAST:NP_001340029.1
Original member Current member NCBI NM_001353103.2 NP_001340032.1 Accepted alive Link to Nucleotide Sequence:NM_001353103.2Link to Protein Sequence:NP_001340032.1Re-query CCDS DB by Nucleotide ID:NM_001353103Re-query CCDS DB by Protein ID:NP_001340032Link to BLAST:NP_001340032.1
Original member Current member NCBI NM_001353104.2 NP_001340033.1 Accepted alive Link to Nucleotide Sequence:NM_001353104.2Link to Protein Sequence:NP_001340033.1Re-query CCDS DB by Nucleotide ID:NM_001353104Re-query CCDS DB by Protein ID:NP_001340033Link to BLAST:NP_001340033.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001230870.1 283 O60256-4 283 100% 0 0
NP_001230871.1 283 O60256-4 283 100% 0 0
NP_001340029.1 283 O60256-4 283 100% 0 0
NP_001340032.1 283 O60256-4 283 100% 0 0
NP_001340033.1 283 O60256-4 283 100% 0 0

Chromosomal Locations for CCDS 58527.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 18877717 18877870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 18882568 18882683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 18889822 18889877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 18911103 18911251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 18923914 18923984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 18928811 18928957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 18930540 18930698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (852 nt):
ATGGAGCTCCTGATCATGGTGTATGCATGTAAGACCTCTTGTGCCAAGAGCATCATTGGCGTGATACCCT
ACTTTCCTTACAGCAAGCAGTGCAAGATGAGAAAAAGAGGCTCCATTGTCTCTAAATTGCTGGCTTCCAT
GATGTGCAAAGCTGGTCTAACTCATCTTATTACTATGGATTTACACCAGAAGGAAATTCAGGGCTTCTTC
AATATTCCTGTTGACAATTTAAGAGCATCTCCCTTCTTATTACAGTATATTCAAGAAGAGATCCCAGATT
ACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCGAAGAGGGCACAGTCTTTTGCTGAGCGCCT
GCGCCTGGGAATTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCAT
TCCCCACCCATGGTCAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGATCCCCATGCTGATTCCTAAAG
AAAAGCCCCCAATCACGGTTGTGGGTGATGTTGGAGGAAGGATTGCCATCATCGTGGATGACATCATTGA
TGATGTTGACAGCTTTCTTGCTGCAGCAGAGACCCTGAAGGAAAGAGGTGCATATAAGATCTTTGTGATG
GCAACTCATGGCTTGTTGTCTTCTGACGCCCCCCGGCGGATTGAAGAGTCTGCCATTGATGAGGTGGTGG
TCACCAATACAATTCCACATGAAGTCCAGAAGCTCCAGTGCCCCAAGATTAAAACTGTGGATATCAGCAT
GATCCTTTCAGAGGCGATCCGTCGGATCCACAATGGGGAGTCCATGTCCTACCTTTTCAGAAACATAGGC
TTAGATGACTGA

Translation (283 aa):
MELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRKRGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFF
NIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRH
SPPMVRSVAAIHPSLEIPMLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVM
ATHGLLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIG
LDD


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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