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Report for CCDS26462.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26462.1 Public Mus musculus 13 Bmp6 23 108 98 CCDS HistoryNCBI Gene:12161Re-query CCDS DB by CCDS ID:26462.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26462.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000171970.2 ENSMUSP00000126999.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000171970.2Link to Ensembl Protein Viewer:ENSMUSP00000126999.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000171970Re-query CCDS DB by Protein ID:ENSMUSP00000126999
Original member NCBI NM_007556.3 NP_031582.1 Updated not alive Link to Nucleotide Sequence:NM_007556.3Link to Protein Sequence:NP_031582.1Re-query CCDS DB by Nucleotide ID:NM_007556Re-query CCDS DB by Protein ID:NP_031582
Current member NCBI NM_007556.4 NP_031582.1 Accepted alive Link to Nucleotide Sequence:NM_007556.4Link to Protein Sequence:NP_031582.1Re-query CCDS DB by Nucleotide ID:NM_007556Re-query CCDS DB by Protein ID:NP_031582Link to BLAST:NP_031582.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031582.1 510 P20722 510 100% 0 0

Chromosomal Locations for CCDS 26462.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 38345933 38346587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 38469614 38469806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 38484891 38485039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 38485739 38485936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 38497295 38497371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 38498717 38498827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 38498919 38499068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1533 nt):
ATGCCCGGGCTGGGGCGGAGGGCGCAGTGGCTGTGCTGGTGGTGGGGGTTGCTGTGCAGCTGCGGCCCCC
CGCCACTGCGGCCCCCTCTGCCGGTAGCCGCGGCCGCCGCCGGGGGGCAGCTGCTGGGAGCCGGCGGGAG
CCCGGTGCGCGCTGAGCAGCCACCGCCACAGTCCTCTTCTTCGGGCTTCCTCTATCGGCGGCTCAAGACC
CACGAGAAGCGGGAGATGCAAAAGGAGATCCTGTCGGTGCTGGGGCTCCCGCACAGGCCGCGGCCCCTGC
ACGGTCTCCAGCAGCCTCAGCCCCCGGTGCTCCCGCCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAC
GGCCCGCGAGGAGCCCCCTCCAGGGCGGCTGAAGTCCGCTCCACTCTTCATGCTGGATCTCTACAACGCC
CTGTCCAATGACGACGAAGAGGATGGGGCATCGGAGGGTGTGGGGCAAGAGCCTGGGTCCCACGGAGGGG
CCAGCTCGTCCCAGCTCAGGCAGCCGTCTCCCGGCGCTGCACACTCCTTGAACCGCAAGAGTCTCCTGGC
CCCGGGACCCGGTGGCGGTGCGTCCCCACTGACTAGCGCGCAGGACAGCGCTTTCCTCAACGACGCGGAC
ATGGTCATGAGCTTTGTGAACCTGGTGGAGTACGACAAGGAGTTCTCCCCACATCAACGACACCACAAAG
AGTTCAAGTTCAACCTATCCCAGATTCCTGAGGGTGAGGCGGTGACGGCTGCTGAGTTCCGCGTCTACAA
GGACTGTGTGGTGGGGAGTTTTAAAAACCAAACCTTTCTTATCAGCATTTACCAAGTCTTGCAGGAGCAT
CAGCACAGAGACTCTGACCTATTTTTGTTGGACACCCGGGTGGTGTGGGCCTCAGAAGAAGGTTGGCTGG
AATTTGACATCACAGCAACTAGCAATCTGTGGGTGGTGACACCGCAGCACAACATGGGGCTCCAGCTGAG
TGTGGTGACTCGGGATGGACTCCACGTCAACCCCCGTGCGGCGGGCCTGGTGGGCAGAGACGGCCCTTAC
GACAAGCAGCCCTTCATGGTGGCCTTCTTCAAGGTGAGCGAGGTCCACGTGCGCACCACCAGGTCAGCCT
CCAGTCGGCGGCGGCAGCAGAGTCGCAACCGGTCCACCCAGTCGCAGGACGTGTCCCGGGGCTCCGGTTC
TTCAGACTACAACGGCAGTGAGTTAAAAACAGCTTGCAAGAAGCATGAGCTCTATGTGAGCTTCCAGGAC
CTGGGATGGCAGGACTGGATCATTGCACCCAAAGGCTACGCTGCCAACTACTGTGATGGAGAGTGTTCCT
TCCCACTCAACGCACACATGAATGCCACCAACCACGCCATTGTACAGACCTTGGTCCACCTTATGAATCC
CGAGTACGTCCCCAAACCATGCTGCGCACCAACCAAACTGAATGCCATCTCGGTTCTTTACTTCGATGAT
AACTCCAATGTCATCTTGAAAAAGTACAGGAATATGGTCGTGAGAGCTTGTGGTTGCCATTAA

Translation (510 aa):
MPGLGRRAQWLCWWWGLLCSCGPPPLRPPLPVAAAAAGGQLLGAGGSPVRAEQPPPQSSSSGFLYRRLKT
HEKREMQKEILSVLGLPHRPRPLHGLQQPQPPVLPPQQQQQQQQQQTAREEPPPGRLKSAPLFMLDLYNA
LSNDDEEDGASEGVGQEPGSHGGASSSQLRQPSPGAAHSLNRKSLLAPGPGGGASPLTSAQDSAFLNDAD
MVMSFVNLVEYDKEFSPHQRHHKEFKFNLSQIPEGEAVTAAEFRVYKDCVVGSFKNQTFLISIYQVLQEH
QHRDSDLFLLDTRVVWASEEGWLEFDITATSNLWVVTPQHNMGLQLSVVTRDGLHVNPRAAGLVGRDGPY
DKQPFMVAFFKVSEVHVRTTRSASSRRRQQSRNRSTQSQDVSRGSGSSDYNGSELKTACKKHELYVSFQD
LGWQDWIIAPKGYAANYCDGECSFPLNAHMNATNHAIVQTLVHLMNPEYVPKPCCAPTKLNAISVLYFDD
NSNVILKKYRNMVVRACGCH


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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