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Report for CCDS38141.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
38141.1 Public Mus musculus 2 Erich2 23 108 98 CCDS HistoryNCBI Gene:66748Re-query CCDS DB by CCDS ID:38141.1Re-query CCDS DB by GeneID:66748See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 38141.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000100041.8 ENSMUSP00000097619.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000100041.8Link to Ensembl Protein Viewer:ENSMUSP00000097619.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000100041Re-query CCDS DB by Protein ID:ENSMUSP00000097619
Original member Current member NCBI NM_025744.2 NP_080020.2 Accepted alive Link to Nucleotide Sequence:NM_025744.2Link to Protein Sequence:NP_080020.2Re-query CCDS DB by Nucleotide ID:NM_025744Re-query CCDS DB by Protein ID:NP_080020Link to BLAST:NP_080020.2

Chromosomal Locations for CCDS 38141.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 70509103 70509565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70509656 70509701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70512760 70512816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70521073 70521108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70522480 70522507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70523044 70523092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70523331 70523367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70527433 70527525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70531676 70531824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70534242 70534423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70536145 70536202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70539678 70539749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70540690 70540811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1392 nt):
ATGGACACCGACCTTCCAGTCACCCTGTCTCCGGCCTTTCTCAAAGTAACCAGGATACGTGGTCAAGCCT
GCCCCAGGGTGTGCGCCCCTAACTTGCCCCGCAGCGCGACGCCCAGTTCCTCCGGACGCTGGGCCACCCG
CGCCGCCCGCTCCGCCCTTCGCGTGGTTCCAGCAGCTGGAACAGTTCCCGCTCCGCTCCCGCCCCGCGCT
CTGCGCCCCGCCCCGGGCCCGCCGCGCTCCGCCCCGCTCGCCCCTCCGCTGCGTCGGGCTGTCCAGTCGC
TGGGCAGCTCGGGTGGTTCCCGGGGCTCCTCCCGCAGCCCGTCCGGTCTCCATGGCAACGCGGCGTCCCA
GGCTCGCAACTCGGAACCCACCGCGAGTGCGGAGCGGGGCTGGCCTTCCTGGTCTGCCCTTCGAGGAAAC
AACTTGGCAGGGCGGCCAGAGGGTAAGCAGCAGTGTGGTGACTGTTGGTCCTGTGGAACCGCACGGCTGT
CGAAATACTGCCCGAGAAGGACAAGAAGTCCCAGCATTCCCCTGGAGAACACGTTGAAGGAAACCAGTTG
CTTAAGTCTTAGCCCTGAATTTTGTATTCCTGAAATTCCCAGCAACTACCTGGACAAGACTGATGTGCAG
GCATCAAAAAGCAGACAGAATGGCAGATTGCTATTGTATGATCCGAAGGAAAAACTGATGAGCGGCGCCA
ATAAAGAAAAGTCACACAAAGCCCCCTTTGGACGCAGGCCGAGATTATCAAACAAGCTTTATACTTCTCC
AGCGCAGATCCCGGGTGGAGCTAATGCATTCTCAGCAAAAAAAGAAGCCTCTTCAAAGAAGAGCGAAGAT
AAAGTCTCTTTTAAAAGTATTGAAAACAGACCATCCTCAAGGAGTACTGAAAATAAAGATGTCTTAACAA
ACCAGCAGTCCGGCCTGTGGTCATCTTCCTTCCTAAAAGAAAGCGCAGGTGAAACAAGCAAGGATTTGGT
CCTTGCAAAGCAAGAGGGAAATAGTGACTATTGCCTTAAGGACATTGAAGAGAACTTGTCAGACTCGACA
GATGGTGATGGTGAAGAGGACAGCAGCAACGACGATGACGAAGGCCCCACTAAGAAGGCGACTCAAGCCC
CACTGGAGCTAATGGCAGAATTCCTGAGAGCAGAAATGGGCCGAGACTACCAGCTGGCAAAAAAATTATG
TCAGATGATCCTAATCTATGAACCAGAAAATCCTGTGGCCAAGGAATTTTTCTCACTTATTGAAGAGATA
TTGCTGAAGGAGAAAGCTCAGGACGAGGAGGACGAAGAGGACAGTGACGAGGACTCGAGCAGCGAGAGCG
AGGTGGACAGCAGTGAGGATGGCAGCGAGGACAGCTCGGACGAGTGCGAGGATGGGTCCTAG

Translation (463 aa):
MDTDLPVTLSPAFLKVTRIRGQACPRVCAPNLPRSATPSSSGRWATRAARSALRVVPAAGTVPAPLPPRA
LRPAPGPPRSAPLAPPLRRAVQSLGSSGGSRGSSRSPSGLHGNAASQARNSEPTASAERGWPSWSALRGN
NLAGRPEGKQQCGDCWSCGTARLSKYCPRRTRSPSIPLENTLKETSCLSLSPEFCIPEIPSNYLDKTDVQ
ASKSRQNGRLLLYDPKEKLMSGANKEKSHKAPFGRRPRLSNKLYTSPAQIPGGANAFSAKKEASSKKSED
KVSFKSIENRPSSRSTENKDVLTNQQSGLWSSSFLKESAGETSKDLVLAKQEGNSDYCLKDIEENLSDST
DGDGEEDSSNDDDEGPTKKATQAPLELMAEFLRAEMGRDYQLAKKLCQMILIYEPENPVAKEFFSLIEEI
LLKEKAQDEEDEEDSDEDSSSESEVDSSEDGSEDSSDECEDGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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