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Report for CCDS57626.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57626.1 Public Mus musculus 8 Otud4 23 108 98 CCDS HistoryNCBI Gene:73945Re-query CCDS DB by CCDS ID:57626.1Re-query CCDS DB by GeneID:73945See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57626.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000173286.7 ENSMUSP00000134097.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000173286.7Link to Ensembl Protein Viewer:ENSMUSP00000134097.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000173286Re-query CCDS DB by Protein ID:ENSMUSP00000134097
Original member Current member NCBI NM_001081164.1 NP_001074633.1 Accepted alive Link to Nucleotide Sequence:NM_001081164.1Link to Protein Sequence:NP_001074633.1Re-query CCDS DB by Nucleotide ID:NM_001081164Re-query CCDS DB by Protein ID:NP_001074633Link to BLAST:NP_001074633.1

Chromosomal Locations for CCDS 57626.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 79639906 79640064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 79643754 79643837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 79646298 79646348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 79651006 79651052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 79651672 79651744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 79653363 79653444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 79655660 79655792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 79658909 79658963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 79659184 79659301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 79659398 79659462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 79661041 79661135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 79663725 79663825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 79663922 79664111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 79664981 79665143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 79666716 79666839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 79667601 79667656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 79668437 79668511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 79669274 79669412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 79669924 79670178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 79671046 79671086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 79672768 79673982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3321 nt):
ATGGAGGCAGCCGTCGGCGCGCCCGACGGCGTGGACCAGGGCGGCGTGGGGCCGCTGGAGGATGAGACGC
CCATGGACGCCTATCTGCGCAAACTGGGCTTGTATCGGAAATTGGTCGCCAAGGACGGGTCGTGCTTGTT
CCGGGCTGTGGCCGAGCAGGTGTTGCACTCTCAGTCTCGGCATGTGGAGGTTAGGATGGCCTGTATCCGC
TACCTTCGAGAGAACAGAGAGAAATTTGAAGCGTTTATAGAAGGGTCATTTGAAGAATATTTAAAACGTT
TGGAAAATCCACAGGAATGGGTAGGACAAGTGGAAATAAGTGCCCTTTCACTTATGTACAGGAAAGATTT
TGTAATATATCAGGAGCCAAATGTTTCTCCTTCACATGTAACTGAAAATAATTTTCCTGAGAAGGTGTTA
CTGTGTTTTTCAAATGGAAATCATTATGACATTGTCTATCCCATAACATATAAAGATAGTTCTGCTATGT
GTCAGTCTCTCCTTTATGAGTTGCTGTATGAGAAGGTATTCAAAACTGATGTTAGTAAAATCATGATGGG
ACTAGAAGCCTCTGAGGTGGCTGAGGAGAGCAACAGTGAGATATCAGACTCTGAGGACGACAGCTGCAAG
AGTAAAAGTACTGCTGCTACTGATGTGAATGGATTTAAACCCTCAGGCAGTGAGAACCCTAAGAACAATG
GGAACTCAGCTGACCTTCCTTTGTCCAGAAAGGTTCTTAAGTCACTCAACCCAGCAGTCTATAGAAATGT
GGAGTATGAAATTTGGTTGAAGTCTAAACAAGCTCAACAAAAACGTGATTATTCCATTGCTGCTGGCTTA
CAGTATGAAGTTGGAGATAAATGCCACGTTAGATTGGATCATAATGGGAAATTATCTAATGCAGACATTC
ATGGGGTTCACTCTGAGAATGGACTGGTTTTGTCTGAAGAACTGGGGAAAAAACATACACCGAAGAACCT
CAAGCCACCTCCCCCAGAAAGCTGGAACACGGTGTCAGGAAAGAAGATGAAAAAACCTAATTCTGGGCAA
AATTTCCATTCAGATACAGATTACAGAGGGCCAAAGAATCTAAACAAGCCAATCAAAGCCCCATCTGCAC
TACCTCCTCGACTCCAGCATCCTTCATCGGGTGTAAGACAGCATGCATTCTCCAGTCATTCTACAGGGTC
CCAGTCTCAGAAATCCTCCAGTGAGCATAAGAATCTAAGTAGGATGCCCTCACAGATCACAAGAAAACCT
GACCGTGAAAGGGCTGAGGACTTTGATCACGTGAGTCGTGAATCTTACTATTTTGGCCTCTCCCCAGAAG
AACGCAGAGAGAAGCAAGCTATTGAAGAGTCTCGTTTACTGTATGAGATTCAGAACCGGGATGAACAGGC
TTTCCCTGCCCTTTCTAGTTCATCAGTCAGTCAGTCACCTTCTCAGAATAGCAATGCGTGTGTCCCAAGG
AAGTCTTCACATGCAAGGGACAGGAAAGGAAGCATGCGGAGAGCAGACGCAGAGGAACGAAAGGACAAAG
ACTCTCTACGTGGCCATACTCATGTGGATAAAAAACCGGAGCCAAGCACACTGGAGATCAGCGATGATAA
ATGTACAAGAGTTTCATCACCATCTAAGTCAAAGAAAGAGTGCCCATCTCCTGTAGAACAAAAGCCAGCA
GAACATATACCTTTGTCAAATCCAGCTCCCCTTCTAGTTTCTCCAGAAGTACATCTCACTCCTGCGGTGC
CTTCTTTACCAGCCACTGTGCCAGCCTGGCCAAGTGAACCTACAACTTTCGGACCAACAGGTGTCCCTGC
TCAGATTCCCATTTTGTCAGTGACACAGACCACTGGACCTGATGCTGCCGTGTCACAAGCGCATTTAACA
CCTTCTCCGGTTCCTGTGTCAATTCAGGCAGTTAACCAGCCCTTGATGCCTTTGCCTCAGACAATGAGCC
TCTATCAAGACCCCCTCTATCCTGGGTTTCCTTGTAGTGAGAAGGGAGATCGAGCCATTGCACCACCTTA
TTCACTGTGTCAGACCGGGGAGGACCTGCCTAAAGATAAGAATATTCTTCGATTCTTCTTCAATCTCGGT
GTAAAGGCATATAGTTGTCCTATGTGGGCCCCACATTCTTACCTATATCCTCTGCACCAGGCCTATATGG
CAGCCTGCAGGATGTACCCAAAGGTCCCTGTTCCCGTGTATCCTCAGAATACTTGGTTCCAAGAAGCCCC
TCCTGCTCAGAGTGAAAGTGACTGTCCTTGCACCGATGCCCACTACTCTCTGCACCCCGAGGCCAGTGTT
AATGGTCAGATGCCACAGGCAGAGATGGGACCGCCTGCATTTGCATCACCTCTGGTTATCCCTCCATCTC
AGGTGTCTGAAGGTCATGGACAATTGTCTTACCAACCTGAACTGGAGTCTGAGAACCCAGGGCAGCTTCT
TCATGCTGAATATGAAGAGTCACTTAGTGGCAAGAACATGTACCCACAACAGTCTTTTGGGCCTAACCCA
TTTTTAGGTCCTGTTCCCATTGCACCTCCTTTCTTCCCTCATGTTTGGTATGGGTATCCTTTTCAGGGAT
TCGTAGAAAATCCTGTAATGAGGCAAAATATTGTCCTGCCCCCTGATGATAAAGGAGAATTGGATTTGCC
TTTGGAGAATCTAGATCTGTCTAAAGAATGCGATTCTGTCTCAGCAGTAGATGAGTTCCCAGACGCCAGA
GTTGAAGGTGCACATTCTCTGTCTGCAGCGAGTGTGAGCAGCAAGCACGAAGGCCGAGTGGAGCAGTCGT
CCCAGACCCGGAAGGCAGACATAGACTTGGCTTCAGGTTCTTCTGCAGTGGAAGGAAAGGGTCATCCTCC
CACTCAGATTCTAAACAGAGAAAGAGAACCTGGGTCTGCTGAACCTGAGCCTAAGAGGACCATTCAAAGT
CTGAAAGAAAAACCAGAGAAAGTAAAAGATCCCAAGACTGCTGCTGATGTGGTCAGCCCTGGGGCCAATT
CTGTGGATAGATTGCAAAGACCAAAAGAAGAGAGTTCAGAAGATGAGAATGAAGTATCTAATATTTTGAG
AAGTGGCAGATCCAAGCAGTTTTATAATCAAACTTACGGAAGCAGGAAGTACAAAAGTGATTGGGGCTCT
TCTGGTCGAGGTGGCTATCAACACGTGAGAGGCGAGGAGTCCTGGAAAGGGCAGCCAAATCGAAGCCGGG
ATGAAGGTTATCAGTACCATCGACATGTTAGAGGACGCCCATACAGGGGAGATAGGAGGAGATCAGGGAT
GGGAGATGGCCACAGGGGACAACACACTTAA

Translation (1106 aa):
MEAAVGAPDGVDQGGVGPLEDETPMDAYLRKLGLYRKLVAKDGSCLFRAVAEQVLHSQSRHVEVRMACIR
YLRENREKFEAFIEGSFEEYLKRLENPQEWVGQVEISALSLMYRKDFVIYQEPNVSPSHVTENNFPEKVL
LCFSNGNHYDIVYPITYKDSSAMCQSLLYELLYEKVFKTDVSKIMMGLEASEVAEESNSEISDSEDDSCK
SKSTAATDVNGFKPSGSENPKNNGNSADLPLSRKVLKSLNPAVYRNVEYEIWLKSKQAQQKRDYSIAAGL
QYEVGDKCHVRLDHNGKLSNADIHGVHSENGLVLSEELGKKHTPKNLKPPPPESWNTVSGKKMKKPNSGQ
NFHSDTDYRGPKNLNKPIKAPSALPPRLQHPSSGVRQHAFSSHSTGSQSQKSSSEHKNLSRMPSQITRKP
DRERAEDFDHVSRESYYFGLSPEERREKQAIEESRLLYEIQNRDEQAFPALSSSSVSQSPSQNSNACVPR
KSSHARDRKGSMRRADAEERKDKDSLRGHTHVDKKPEPSTLEISDDKCTRVSSPSKSKKECPSPVEQKPA
EHIPLSNPAPLLVSPEVHLTPAVPSLPATVPAWPSEPTTFGPTGVPAQIPILSVTQTTGPDAAVSQAHLT
PSPVPVSIQAVNQPLMPLPQTMSLYQDPLYPGFPCSEKGDRAIAPPYSLCQTGEDLPKDKNILRFFFNLG
VKAYSCPMWAPHSYLYPLHQAYMAACRMYPKVPVPVYPQNTWFQEAPPAQSESDCPCTDAHYSLHPEASV
NGQMPQAEMGPPAFASPLVIPPSQVSEGHGQLSYQPELESENPGQLLHAEYEESLSGKNMYPQQSFGPNP
FLGPVPIAPPFFPHVWYGYPFQGFVENPVMRQNIVLPPDDKGELDLPLENLDLSKECDSVSAVDEFPDAR
VEGAHSLSAASVSSKHEGRVEQSSQTRKADIDLASGSSAVEGKGHPPTQILNREREPGSAEPEPKRTIQS
LKEKPEKVKDPKTAADVVSPGANSVDRLQRPKEESSEDENEVSNILRSGRSKQFYNQTYGSRKYKSDWGS
SGRGGYQHVRGEESWKGQPNRSRDEGYQYHRHVRGRPYRGDRRRSGMGDGHRGQHT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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