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Report for CCDS19045.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19045.1 Public Mus musculus 4 Dvl1 23 108 98 CCDS HistoryNCBI Gene:13542Re-query CCDS DB by CCDS ID:19045.1Re-query CCDS DB by GeneID:13542See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19045.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000030948.15 ENSMUSP00000030948.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000030948.15Link to Ensembl Protein Viewer:ENSMUSP00000030948.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000030948Re-query CCDS DB by Protein ID:ENSMUSP00000030948
Original member Current member EBI ENSMUST00000168552.1 ENSMUSP00000133137.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000168552.1Link to Ensembl Protein Viewer:ENSMUSP00000133137.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000168552Re-query CCDS DB by Protein ID:ENSMUSP00000133137
Original member Current member NCBI NM_010091.5 NP_034221.3 Accepted alive Link to Nucleotide Sequence:NM_010091.5Link to Protein Sequence:NP_034221.3Re-query CCDS DB by Nucleotide ID:NM_010091Re-query CCDS DB by Protein ID:NP_034221Link to BLAST:NP_034221.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034221.3 695 P51141 695 100% 0 0

Chromosomal Locations for CCDS 19045.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 155847735 155847904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155853418 155853487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155853637 155853758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155853983 155854086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155854330 155854468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155854566 155854659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155854731 155854800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155854886 155855025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155855104 155855180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155855272 155855339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155855467 155855619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155856132 155856263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155856362 155856529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155856614 155856820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155857993 155858366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2088 nt):
ATGGCGGAGACCAAAATCATCTACCACATGGACGAGGAGGAGACGCCGTACCTGGTCAAGCTGCCCGTAG
CTCCCGAGCGCGTCACGCTGGCCGACTTCAAGAACGTGCTCAGCAACCGGCCGGTGCACGCCTACAAATT
CTTCTTCAAGTCCATGGACCAGGACTTCGGGGTGGTGAAGGAGGAGATCTTCGATGACAATGCCAAGTTG
CCCTGCTTCAATGGCCGGGTGGTTTCCTGGCTGGTCCTGGCTGAGGGCGCTCACTCGGATGCAGGGTCCC
AGGGCACTGACAGCCACACGGACCTGCCCCCACCCCTTGAGAGGACAGGCGGCATTGGGGACTCCAGGCC
CCCCTCCTTCCATCCAAATGTTGCCAGTAGCCGGGACGGAATGGACAATGAGACAGGCACAGAGTCTATG
GTCAGTCACCGGCGGGAGCGAGCCCGACGTCGAAACCGCGATGAGGCTGCCCGGACCAATGGGCACCCGA
GAGGGGATCGGCGGCGGGACCTGGGACTACCTCCAGACAGTGCATCCACTGTACTGAGCAGTGAGCTTGA
ATCTAGCAGCTTTATTGACTCAGATGAGGAGGACAATACGAGCCGGCTGAGCAGCTCCACAGAGCAGAGC
ACCTCCTCTCGGCTAGTTCGGAAGCACAAATGCCGTCGTCGGAAGCAGCGCTTGAGGCAGACAGACCGGG
CATCCTCCTTCAGCAGCATCACAGACTCCACCATGTCCCTGAACATCATCACCGTCACTCTCAACATGGA
GAGGCACCACTTCCTGGGCATCAGCATCGTGGGCCAGAGCAACGACCGGGGTGATGGCGGCATCTACATT
GGATCCATCATGAAGGGCGGGGCCGTGGCTGCTGATGGCCGCATTGAGCCGGGCGACATGTTGCTGCAGG
TGAACGATGTCAACTTTGAGAACATGAGCAATGACGACGCTGTACGGGTGCTTCGGGAGATCGTGTCCCA
GACAGGGCCCATCAGTCTCACAGTGGCCAAGTGCTGGGACCCAACCCCTCGGAGCTACTTCACCATCCCA
AGGGCTGACCCAGTGCGACCCATCGACCCGGCTGCCTGGCTGTCCCACACAGCAGCACTGACGGGTGCCC
TGCCCCGCTATGGTACGAGTCCCTGCTCCAGCGCCATCACACGCACCAGCTCTTCCTCACTAACCAGCTC
AGTGCCTGGCGCCCCACAGCTTGAGGAGGCACCGCTGACTGTGAAGAGTGACATGAGTGCCATTGTCCGC
GTCATGCAGTTGCCAGACTCAGGACTGGAGATCCGGGACCGCATGTGGCTTAAGATCACCATTGCCAATG
CTGTCATTGGGGCGGATGTGGTGGACTGGCTGTACACACACGTGGAGGGCTTCAAGGAGCGAAGGGAGGC
AAGAAAGTATGCCAGCAGTATGCTGAAGCACGGTTTCCTGAGGCACACCGTGAACAAGATCACCTTTTCT
GAGCAGTGCTACTATGTCTTTGGCGACCTGTGCAGTAACCTCGCATCCCTGAACCTCAACAGTGGCTCCA
GTGGAGCCTCAGATCAGGACACACTGGCCCCACTGCCCCACCCATCAGTACCCTGGCCCTTGGGTCAAGG
CTACCCCTACCAGTACCCAGGACCCCCGCCCTGCTTCCCGCCTGCTTACCAGGACCCTGGCTTCAGCTGC
GGCAGCGGCAGTGCTGGGAGCCAGCAGAGTGAAGGGAGCAAGAGCAGTGGGTCCACACGGAGCAGCCATC
GGACCCCAGGCCGAGAGGAGCGCCGGGCAACTGGAGCTGGGGGTAGTGGCAGTGAATCAGACCACACAGT
ACCAAGTGGGTCTGGTAGCACCGGCTGGTGGGAGCGGCCTGTCAGCCAGCTTAGCCGTGGCAGTAGCCCT
CGAAGTCAGGCTTCAGCTGTTGCCCCAGGGCTCCCCCCACTGCACCCCCTTACAAAGGCCTATGCAGTAG
TGGGTGGGCCACCTGGAGGGCCACCCGTCCGGGAGCTGGCTGCTGTCCCTCCAGAACTTACAGGTAGCCG
CCAGTCCTTCCAAAAGGCCATGGGAAACCCCTGTGAGTTCTTTGTGGACATCATGTGA

Translation (695 aa):
MAETKIIYHMDEEETPYLVKLPVAPERVTLADFKNVLSNRPVHAYKFFFKSMDQDFGVVKEEIFDDNAKL
PCFNGRVVSWLVLAEGAHSDAGSQGTDSHTDLPPPLERTGGIGDSRPPSFHPNVASSRDGMDNETGTESM
VSHRRERARRRNRDEAARTNGHPRGDRRRDLGLPPDSASTVLSSELESSSFIDSDEEDNTSRLSSSTEQS
TSSRLVRKHKCRRRKQRLRQTDRASSFSSITDSTMSLNIITVTLNMERHHFLGISIVGQSNDRGDGGIYI
GSIMKGGAVAADGRIEPGDMLLQVNDVNFENMSNDDAVRVLREIVSQTGPISLTVAKCWDPTPRSYFTIP
RADPVRPIDPAAWLSHTAALTGALPRYGTSPCSSAITRTSSSSLTSSVPGAPQLEEAPLTVKSDMSAIVR
VMQLPDSGLEIRDRMWLKITIANAVIGADVVDWLYTHVEGFKERREARKYASSMLKHGFLRHTVNKITFS
EQCYYVFGDLCSNLASLNLNSGSSGASDQDTLAPLPHPSVPWPLGQGYPYQYPGPPPCFPPAYQDPGFSC
GSGSAGSQQSEGSKSSGSTRSSHRTPGREERRATGAGGSGSESDHTVPSGSGSTGWWERPVSQLSRGSSP
RSQASAVAPGLPPLHPLTKAYAVVGGPPGGPPVRELAAVPPELTGSRQSFQKAMGNPCEFFVDIM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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