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Report for CCDS90230.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90230.1 Public Mus musculus 7 Fcgrt 23 108 98 CCDS HistoryNCBI Gene:14132Re-query CCDS DB by CCDS ID:90230.1Re-query CCDS DB by GeneID:14132See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90230.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000210642.1 ENSMUSP00000147496.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000210642.1Link to Ensembl Protein Viewer:ENSMUSP00000147496.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000210642Re-query CCDS DB by Protein ID:ENSMUSP00000147496
Original member Current member NCBI NM_001357117.1 NP_001344046.1 Accepted alive Link to Nucleotide Sequence:NM_001357117.1Link to Protein Sequence:NP_001344046.1Re-query CCDS DB by Nucleotide ID:NM_001357117Re-query CCDS DB by Protein ID:NP_001344046Link to BLAST:NP_001344046.1

Chromosomal Locations for CCDS 90230.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 45093246 45093355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45093782 45093898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45095160 45095429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45101910 45102185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45102402 45102671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45103003 45103069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1110 nt):
ATGGGGATGCCACTGCCCTGGGCCCTCAGCCTCTTGTTGGTCCTCCTGCCTCAGACCTGGGGCTCAGAGA
CCCGCCCCCCACTGATGTATCATCTCACGGCTGTGTCAAACCCATCTACGGGGCTTCCCTCTTTCTGGGC
TACAGGCTGGTTGGGTCCTCAGCAGTATCTGACCTACAACAGCCTGCGGCAGGAAGCTGACCCCTGTGGG
GCCTGGATGTGGGAAAATCAGGTGTCTTGGTATTGGGAGAAGGAGACCACAGACCTCAAAAGCAAAGAAC
AGCTCTTCTTGGAGGCCCTCAAGACCCTGGAGAAGATATTAAATGGTCAGAAGAGGGGGACCTACACACT
GCAGGGCCTGCTGGGCTGTGAACTGGCCTCGGATAATTCCTCAGTGCCCACGGCTGTGTTTGCCCTCAAT
GGTGAGGAGTTTATGAAATTCAACCCAAGAATCGGCAATTGGACTGGGGAGTGGCCTGAGACGGAAATCG
TTGCTAATCTGTGGATGAAGCAGCCTGATGCGGCCAGGAAGGAGAGCGAGTTCCTGCTAAACTCTTGTCC
GGAGCGACTGCTAGGCCACCTGGAGAGGGGCCGACGGAACCTGGAGTGGAAGGAGCCGCCGTCTATGCGC
CTGAAGGCCCGTCCTGGCAACTCTGGCTCCTCCGTGCTGACCTGTGCTGCTTTCTCCTTCTACCCACCGG
AGCTCAAGTTCCGATTCCTGCGCAATGGGCTAGCCTCAGGCTCCGGGAATTGCAGCACTGGTCCCAATGG
AGATGGCTCTTTCCACGCATGGTCATTGCTGGAGGTCAAACGTGGAGATGAGCACCATTATCAATGTCAA
GTGGAGCATGAGGGGCTGGCACAGCCTCTCACTGTGGACCTAGATTCATCAGCCAGATCTTCTGTGCCTG
TGGTTGGAATCGTTCTTGGTTTATTGCTGGTGGTAGTGGCCATCGCAGGCGGTGTGCTGTTGTGGGGCAG
GATGCGCAGCGGTCTGCCAGCCCCATGGCTTTCTCTCAGCGGCGATGACTCTGGTGACCTGTTGCCTGGT
GGGAACTTGCCCCCAGAAGCTGAACCTCAAGGTGCAAATGCCTTTCCAGCCACTTCCTGA

Translation (369 aa):
MGMPLPWALSLLLVLLPQTWGSETRPPLMYHLTAVSNPSTGLPSFWATGWLGPQQYLTYNSLRQEADPCG
AWMWENQVSWYWEKETTDLKSKEQLFLEALKTLEKILNGQKRGTYTLQGLLGCELASDNSSVPTAVFALN
GEEFMKFNPRIGNWTGEWPETEIVANLWMKQPDAARKESEFLLNSCPERLLGHLERGRRNLEWKEPPSMR
LKARPGNSGSSVLTCAAFSFYPPELKFRFLRNGLASGSGNCSTGPNGDGSFHAWSLLEVKRGDEHHYQCQ
VEHEGLAQPLTVDLDSSARSSVPVVGIVLGLLLVVVAIAGGVLLWGRMRSGLPAPWLSLSGDDSGDLLPG
GNLPPEAEPQGANAFPATS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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