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Report for CCDS22439.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22439.1 Public Mus musculus 8 Anapc10 23 108 98 CCDS HistoryNCBI Gene:68999Re-query CCDS DB by CCDS ID:22439.1Re-query CCDS DB by GeneID:68999See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22439.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000048147.8 ENSMUSP00000048244.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000048147.8Link to Ensembl Protein Viewer:ENSMUSP00000048244.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000048147Re-query CCDS DB by Protein ID:ENSMUSP00000048244
Original member Current member EBI ENSMUST00000210812.1 ENSMUSP00000148220.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000210812.1Link to Ensembl Protein Viewer:ENSMUSP00000148220.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000210812Re-query CCDS DB by Protein ID:ENSMUSP00000148220
Original member Current member NCBI NM_001357234.1 NP_001344163.1 Accepted alive Link to Nucleotide Sequence:NM_001357234.1Link to Protein Sequence:NP_001344163.1Re-query CCDS DB by Nucleotide ID:NM_001357234Re-query CCDS DB by Protein ID:NP_001344163Link to BLAST:NP_001344163.1
Original member Current member NCBI NM_001357235.1 NP_001344164.1 Accepted alive Link to Nucleotide Sequence:NM_001357235.1Link to Protein Sequence:NP_001344164.1Re-query CCDS DB by Nucleotide ID:NM_001357235Re-query CCDS DB by Protein ID:NP_001344164Link to BLAST:NP_001344164.1
Original member Current member NCBI NM_001357236.1 NP_001344165.1 Accepted alive Link to Nucleotide Sequence:NM_001357236.1Link to Protein Sequence:NP_001344165.1Re-query CCDS DB by Nucleotide ID:NM_001357236Re-query CCDS DB by Protein ID:NP_001344165Link to BLAST:NP_001344165.1
Original member Current member NCBI NM_026904.3 NP_081180.1 Accepted alive Link to Nucleotide Sequence:NM_026904.3Link to Protein Sequence:NP_081180.1Re-query CCDS DB by Nucleotide ID:NM_026904Re-query CCDS DB by Protein ID:NP_081180Link to BLAST:NP_081180.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001344163.1 185 Q8K2H6 185 100% 0 0
NP_001344164.1 185 Q8K2H6 185 100% 0 0
NP_001344165.1 185 Q8K2H6 185 100% 0 0
NP_081180.1 185 Q8K2H6 185 100% 0 0

Chromosomal Locations for CCDS 22439.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 79713165 79713279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 79719658 79719748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 79729130 79729250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 79774932 79775162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (558 nt):
ATGACCACACCGAACAAGACACCTCCTGGTGCTGATCCTAAGCAGTTGGAGAGGACAGCAACAGTCAGGG
AAATTGGGTCTCAGGCTGTTTGGTCACTCTCTTCCTGCAAACCAGGGTTTGGAGTGGATCAATTACGGGA
TGACAATCTAGAAACTTACTGGCAATCTGATGGCTCTCAGCCTCACTTAGTGAACATCCAATTCAGAAGA
AAAACAACAGTGAAGACATTATGTATTTATGCAGACTATAAGTCTGATGAAAGCTACACTCCAAGCAAAA
TCTCAGTCAGAGTAGGAAATAATTTTCACAACCTTCAAGAAATCCGGCAACTTGAATTGGTGGAACCAAG
TGGCTGGATTCACGTTCCTTTAACTGACAATCATAAGAAGCCAACTCGCACATTCATGATACAGATTGCT
GTTCTAGCCAATCATCAGAATGGAAGAGATACCCACATGAGACAAATTAAGATATACACACCAGTGGAAG
AGAGCTCCATTGGGAAATTCCCTAGATGCACAACCATTGATTTCATGATGTATCGTTCAATACGGTGA

Translation (185 aa):
MTTPNKTPPGADPKQLERTATVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRR
KTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKPTRTFMIQIA
VLANHQNGRDTHMRQIKIYTPVEESSIGKFPRCTTIDFMMYRSIR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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