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Report for CCDS31105.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31105.1 Public Homo sapiens 1 OR2M5 24 110 108 CCDS HistoryNCBI Gene:127059Re-query CCDS DB by CCDS ID:31105.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 31105.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000366476.1 ENSP00000355432.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000366476.1Link to Ensembl Protein Viewer:ENSP00000355432.1Re-query CCDS DB by Nucleotide ID:ENST00000366476Re-query CCDS DB by Protein ID:ENSP00000355432
Original member Current member NCBI NM_001004690.1 NP_001004690.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004690.1Link to Protein Sequence:NP_001004690.1Re-query CCDS DB by Nucleotide ID:NM_001004690Re-query CCDS DB by Protein ID:NP_001004690Link to BLAST:NP_001004690.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004690.1 312 A3KFT3 312 100% 0 0

Chromosomal Locations for CCDS 31105.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 248145148 248146086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGGCATGGGAGAATCAGACCTTCAACTCTGACTTCATCCTCCTGGGAATCTTCAATCACAGCCCCACCC
ACACCTTCCTCTTCTTTCTGGTCCTGGCCATCTTTTCAGTGGCCTTCATGGGAAACTCTGTCATGGTTCT
CCTCATCTACCTGGACACCCAGCTCCACACCCCCATGTACTTCCTCCTCAGTCAACTGTTCCTCATGGAC
CTCATGCTCATCTGCTCTACCGTACCCAAGATGGCCTTCAACTACTTGTCTGGCAGCAAGTCCATTTCTA
TGGCTGGTTGTGCCACACAAATTTTCTTCTATGTATCACTGCTTGGCTCCGAATGCTTTCTGTTGGCTGT
TATGTCTTATGACCGCTATATTGCCATTTGCCACCCTCTAAGATACACCAATCTCATGAGACCCAAAATT
TGTGGACTTATGACTGCCTTCTCCTGGATCCTGGGCTCTATGGATGCAATCATTGATGCTGTAGCGACAT
TTTCCTTCTCCTACTGTGGGTCTCGGGAAATAGCCCACTTCTTCTGTGACTTCCCTTCCCTACTAATCCT
CTCATGCAATGACACATCAATATTTGAAAAGGTTCTTTTCATCTGCTGTATAGTAATGATTGTTTTTCCT
GTTGCAATCATCATCGCTTCCTATGCTCGAGTTATTCTGGCTGTCATTCACATGGGATCTGGAGAGGGTC
GTCGCAAAGCTTTTACTACCTGTTCCTCTCACCTCATGGTGGTGGGAATGTACTATGGAGCAGGTTTGTT
CATGTACATACGGCCCACATCTGATCGCTCCCCTATGCAGGACAAGCTGGTGTCTGTATTCTACACCATC
CTCACTCCCATGCTGAATCCCCTCATCTACAGCCTCCGCAACAAGGAGGTGACCAGAGCACTCAGGAAAG
TGTTAGGAAAGGGCAAGTGTGGAGAGTGA

Translation (312 aa):
MAWENQTFNSDFILLGIFNHSPTHTFLFFLVLAIFSVAFMGNSVMVLLIYLDTQLHTPMYFLLSQLFLMD
LMLICSTVPKMAFNYLSGSKSISMAGCATQIFFYVSLLGSECFLLAVMSYDRYIAICHPLRYTNLMRPKI
CGLMTAFSWILGSMDAIIDAVATFSFSYCGSREIAHFFCDFPSLLILSCNDTSIFEKVLFICCIVMIVFP
VAIIIASYARVILAVIHMGSGEGRRKAFTTCSSHLMVVGMYYGAGLFMYIRPTSDRSPMQDKLVSVFYTI
LTPMLNPLIYSLRNKEVTRALRKVLGKGKCGE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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