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Report for CCDS22711.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22711.1 Public Mus musculus 8 Wfdc1 23 108 98 CCDS HistoryNCBI Gene:67866Re-query CCDS DB by CCDS ID:22711.1Re-query CCDS DB by GeneID:67866See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22711.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000024107.6 ENSMUSP00000024107.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000024107.6Link to Ensembl Protein Viewer:ENSMUSP00000024107.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000024107Re-query CCDS DB by Protein ID:ENSMUSP00000024107
Original member Current member NCBI NM_023395.2 NP_075884.1 Accepted alive Link to Nucleotide Sequence:NM_023395.2Link to Protein Sequence:NP_075884.1Re-query CCDS DB by Nucleotide ID:NM_023395Re-query CCDS DB by Protein ID:NP_075884Link to BLAST:NP_075884.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075884.1 211 Q9ESH5 211 100% 0 0

Chromosomal Locations for CCDS 22711.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 119666541 119666660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119679268 119679457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119680155 119680238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119681032 119681172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119683750 119683791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119686261 119686319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (636 nt):
ATGGGTAACTGCGGCAGAAAAGTCCTTCGGGCTCTGAGTTTCCTGTTGCTACTGGGCTCCAGTTCTGCCC
AGGGCACTTGGGAGGCAATGCTGCCGGCCAGGCTGGCCGAGAAGTCCCGAGCTGAAGAGGTTGCAGCGAC
AGGCTCCCGGCAGCCCCATGCAGACCGCTGCCCACCACCGCCAAGGACACTGCCCCCGGGTGCCTGTCAG
GCCACACGCTGCCAGGCTGACTCTGAGTGCCCACGACACAGGCGCTGCTGCTACAATGGCTGTGCCTATG
CCTGCCTGGAGGCGGTGCCACCTCCGCCAGTTCTAGACTGGCTGGTGCAGCCCAAACCACGATGGCTGGG
TGGCAACGGCTGGCTGCTGGACGGTCCTGAGGAAGTGTTACAAGCAGAGACTTGCAGCACCACTGAGGAT
GGGGCAGAGCCACTCCTCTGTCCCTCAGGCTATGAGTGCCATATCCTGCAGCCAGGGGACGAAGCCCAGG
GCATACCCAACCATGGACAGTGTGTTAAGCAACGCCGGCAAGCAGAAGGGCGGGTCCTGCGACAGAGGCT
TCACAAGGAATATCCAGAAGGTGACTCCAAGAATGTGGCAGAGCCTGGGAAGGGACAACAGAGGCACTTT
CCATAA

Translation (211 aa):
MGNCGRKVLRALSFLLLLGSSSAQGTWEAMLPARLAEKSRAEEVAATGSRQPHADRCPPPPRTLPPGACQ
ATRCQADSECPRHRRCCYNGCAYACLEAVPPPPVLDWLVQPKPRWLGGNGWLLDGPEEVLQAETCSTTED
GAEPLLCPSGYECHILQPGDEAQGIPNHGQCVKQRRQAEGRVLRQRLHKEYPEGDSKNVAEPGKGQQRHF
P


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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