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Report for CCDS3076.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3076.1 Public Homo sapiens 3 UBA5 24 110 108 CCDS HistoryNCBI Gene:79876Re-query CCDS DB by CCDS ID:3076.1Re-query CCDS DB by GeneID:79876See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3076.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356232.10 ENSP00000348565.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000356232.10Link to Ensembl Protein Viewer:ENSP00000348565.4Re-query CCDS DB by Nucleotide ID:ENST00000356232Re-query CCDS DB by Protein ID:ENSP00000348565
Original member Current member NCBI NM_024818.6 NP_079094.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024818.6Link to Protein Sequence:NP_079094.1Re-query CCDS DB by Nucleotide ID:NM_024818Re-query CCDS DB by Protein ID:NP_079094Link to BLAST:NP_079094.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079094.1 404 Q9GZZ9-1 404 100% 0 0

Chromosomal Locations for CCDS 3076.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 132660538 132660698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132665823 132665868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132665984 132666073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132668818 132668927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132670198 132670284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132670965 132671049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132671777 132671881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132672050 132672177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132675248 132675383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132675605 132675680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132675817 132675923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132676443 132676526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1215 nt):
ATGGCGGAGTCTGTGGAGCGCCTGCAGCAGCGGGTCCAGGAGCTGGAGCGGGAACTTGCCCAGGAGAGGA
GTCTGCAGGTCCCGAGGAGCGGCGACGGAGGGGGCGGCCGGGTCCGCATCGAGAAGATGAGCTCAGAGGT
GGTGGATTCGAATCCCTACAGCCGCTTGATGGCATTGAAACGAATGGGAATTGTAAGCGACTATGAGAAA
ATCCGTACCTTTGCCGTAGCAATAGTAGGTGTTGGTGGAGTAGGTAGTGTGACTGCTGAAATGCTGACAA
GATGTGGCATTGGTAAGTTGCTACTCTTTGATTATGACAAGGTGGAACTAGCCAATATGAATAGACTTTT
CTTCCAACCTCATCAAGCAGGATTAAGTAAAGTTCAAGCAGCAGAACATACTCTGAGGAACATTAATCCT
GATGTTCTTTTTGAAGTACACAACTATAATATAACCACAGTGGAAAACTTTCAACATTTCATGGATAGAA
TAAGTAATGGTGGGTTAGAAGAAGGAAAACCTGTTGATCTAGTTCTTAGCTGTGTGGACAATTTTGAAGC
TCGAATGACAATAAATACAGCTTGTAATGAACTTGGACAAACATGGATGGAATCTGGGGTCAGTGAAAAT
GCAGTTTCAGGGCATATACAGCTTATAATTCCTGGAGAATCTGCTTGTTTTGCGTGTGCTCCACCACTTG
TAGTTGCTGCAAATATTGATGAAAAGACTCTGAAACGAGAAGGTGTTTGTGCAGCCAGTCTTCCTACCAC
TATGGGTGTGGTTGCTGGGATCTTAGTACAAAACGTGTTAAAGTTTCTGTTAAATTTTGGTACTGTTAGT
TTTTACCTTGGATACAATGCAATGCAGGATTTTTTTCCTACTATGTCCATGAAGCCAAATCCTCAGTGTG
ATGACAGAAATTGCAGGAAGCAGCAGGAGGAATATAAGAAAAAGGTAGCAGCACTGCCTAAACAAGAGGT
TATACAAGAAGAGGAAGAGATAATCCATGAAGATAATGAATGGGGTATTGAGCTGGTATCTGAGGTTTCA
GAAGAGGAACTGAAAAATTTTTCAGGTCCAGTTCCAGACTTACCTGAAGGAATTACAGTGGCATACACAA
TTCCAAAAAAGCAAGAAGATTCTGTCACTGAGTTAACAGTGGAAGATTCTGGTGAAAGCTTGGAAGACCT
CATGGCCAAAATGAAGAATATGTAG

Translation (404 aa):
MAESVERLQQRVQELERELAQERSLQVPRSGDGGGGRVRIEKMSSEVVDSNPYSRLMALKRMGIVSDYEK
IRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINP
DVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSEN
AVSGHIQLIIPGESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVAGILVQNVLKFLLNFGTVS
FYLGYNAMQDFFPTMSMKPNPQCDDRNCRKQQEEYKKKVAALPKQEVIQEEEEIIHEDNEWGIELVSEVS
EEELKNFSGPVPDLPEGITVAYTIPKKQEDSVTELTVEDSGESLEDLMAKMKNM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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