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Report for CCDS26303.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26303.1 Public Mus musculus 13 Prss16 23 108 98 CCDS HistoryNCBI Gene:54373Re-query CCDS DB by CCDS ID:26303.1Re-query CCDS DB by GeneID:54373See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 26303.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000006341.3 ENSMUSP00000006341.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000006341.3Link to Ensembl Protein Viewer:ENSMUSP00000006341.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000006341Re-query CCDS DB by Protein ID:ENSMUSP00000006341
Original member Current member NCBI NM_019429.2 NP_062302.1 Accepted alive Link to Nucleotide Sequence:NM_019429.2Link to Protein Sequence:NP_062302.1Re-query CCDS DB by Nucleotide ID:NM_019429Re-query CCDS DB by Protein ID:NP_062302Link to BLAST:NP_062302.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062302.1 509 Q9QXE5 509 100% 0 0

Chromosomal Locations for CCDS 26303.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 22002754 22002810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 22002926 22003071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 22003146 22003325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 22005091 22005232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 22005982 22006272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 22006747 22006794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 22006888 22006965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 22007143 22007266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 22008330 22008459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 22008579 22008678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 22009390 22009556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 22009631 22009697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1530 nt):
ATGGCAGTCAAGGCTCCATGGTTGGGATTCTTGCTTCTGGTTTCCCTCTGGGGACTGTCAACTCCAGCCT
TGCTTCTCAGGCGCCTGAGGGAACACATTCAGAAGTTTCAGGAGAGCTCTAGCCTACACCCAGGCTTTGG
ACTAGGCCATGGTCCTGGGGCTGTCCCCAAACAAGGGTGGTTAGAACAGCCACTGGATCCCTTCAATGCA
TCTGACAGACGAACCTTCCTGCAGCGGTACTGGGTGAATGATCAACACAGAACTGGCCAAGATGTACCAG
TATTTCTGCACATAGGAGGCGAGGGCAGCCTTGGGCCTGGCTCAGTGATGGCAGGGCATCCTGCGGCACT
GGCCCCTGCCTGGGGGGCCCTGGTGATAAGCCTAGAACACAGATTCTATGGTTTGAGTATGCCTGCTGGG
GGCCTGGATCTGGCCCTGCTTCGCTACTTGTCCAGCCGCCATGCGTTGGCTGACGTGGCTTCCGCTCGCC
AGGCGCTCTCCGGCCTCCTCAATGTGTCTTCTTCCAGCCCTTGGATCTGCTTCGGAGGCTCCTACGCTGG
CTCGCTGGCGACCTGGGCCCGGCTGAAGTTCCCCCACCTAGTCTTTGCCGCCGTCGCCTCCTCAGCACCG
CTGAGCGCTGTAGTGGACTTCTCCGCCTATAACCAGGTGGTGGCCAGAAGCCTGACACAAGTCGCCATAG
GAGGATCATTGGAGTGTCTGGCGGCGGCCTCCACCGCCTTCACGGAGGTGGAGCGGCTGCTGCGCGCAGG
CCCGGCGGCTCAGGCTGTGCTGAGGGAGGAACTGGGCGCCTGCGGGTCCCTGGACCTTACGGAAGACCAG
GCGGAGCTGCTGGGAGCGTTGCAGGCGCTGGTGGGCGGCACCGTGCAGTACGACGGGCAGGCGGGAGCGC
CGCTAAGCGTGCGCCAGCTCTGCGGTCTCCTGCTCGGGAAGTGGGGAAACCGCAGCCGCTCCACGCCCTA
CTTGGGGCTTCGCCGGGCTGTACAGATAGTCTTGCGCAGCATGGGACAGAAGTGTTTAAGCTTTTCCCGG
GCAGAGACAGTGGCACAGCTGAGCAACACCGAACCGCAAGTGTCTGGTGTGGGGGACCGGCAGTGGTTGT
ACCAGACATGCACTGAGTTTGGCTTCTATGTCACCTGTGAGGGTCTTCAGTGTCCTTTTTCCCAGCTCCC
AGCACTGCCCTTCCAGCTAGAGCTGTGTGAACAAGTGTTTGGCCTCTCACCTGCATCTGTTGCCCAGGCT
GTGGCCCAGACAAACTCCTATTATGGTGGTCAGAGCCCTGGAGCCACCCAAGTACTGTTTGTTAATGGAG
ACACAGATCCTTGGCATGTATTGAGCGTAACACAGGACTTAGGACTGTCTGAGCCAGCCCTTCTAATTCC
TAGTGCTTCCCACTGCTTCGATATGGCACCTATGAGGCCTTCAGACTCTCCCAGCCTCCGCCTGGGACGT
CAGAAAATCTCCCAGCAATTACAGGATTGGCTCAAAGATATAAAGAAGAGCCAGAGTTGA

Translation (509 aa):
MAVKAPWLGFLLLVSLWGLSTPALLLRRLREHIQKFQESSSLHPGFGLGHGPGAVPKQGWLEQPLDPFNA
SDRRTFLQRYWVNDQHRTGQDVPVFLHIGGEGSLGPGSVMAGHPAALAPAWGALVISLEHRFYGLSMPAG
GLDLALLRYLSSRHALADVASARQALSGLLNVSSSSPWICFGGSYAGSLATWARLKFPHLVFAAVASSAP
LSAVVDFSAYNQVVARSLTQVAIGGSLECLAAASTAFTEVERLLRAGPAAQAVLREELGACGSLDLTEDQ
AELLGALQALVGGTVQYDGQAGAPLSVRQLCGLLLGKWGNRSRSTPYLGLRRAVQIVLRSMGQKCLSFSR
AETVAQLSNTEPQVSGVGDRQWLYQTCTEFGFYVTCEGLQCPFSQLPALPFQLELCEQVFGLSPASVAQA
VAQTNSYYGGQSPGATQVLFVNGDTDPWHVLSVTQDLGLSEPALLIPSASHCFDMAPMRPSDSPSLRLGR
QKISQQLQDWLKDIKKSQS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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