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Report for CCDS38966.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
38966.1 Public Mus musculus 4 Disp3 23 108 98 CCDS HistoryNCBI Gene:242748Re-query CCDS DB by CCDS ID:38966.1Re-query CCDS DB by GeneID:242748See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 38966.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000047720.8 ENSMUSP00000038490.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000047720.8Link to Ensembl Protein Viewer:ENSMUSP00000038490.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000047720Re-query CCDS DB by Protein ID:ENSMUSP00000038490
Original member Current member NCBI NM_001083342.1 NP_001076811.1 Accepted alive Link to Nucleotide Sequence:NM_001083342.1Link to Protein Sequence:NP_001076811.1Re-query CCDS DB by Nucleotide ID:NM_001083342Re-query CCDS DB by Protein ID:NP_001076811Link to BLAST:NP_001076811.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001076811.1 1347 A3KFU9-1 1347 99.7773% 0 3

Chromosomal Locations for CCDS 38966.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 148241256 148241618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 148242745 148242911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 148243331 148243444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 148244106 148244265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 148249140 148249285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 148249741 148249867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 148250619 148250791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 148250885 148251015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 148252694 148252878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 148254235 148254371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 148255121 148255234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 148256788 148256949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 148257749 148257910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 148258089 148258237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 148258699 148258838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 148259830 148259990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 148260480 148260614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 148261064 148261200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 148270377 148270596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 148271441 148272401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4044 nt):
ATGGACTCAGAGGATGATCCCCTGCTGCAGGATGTGTGGCTAGAAGAGGAACAGCCGGAAGATGAAGCCT
GCAGGGGTATCCCCGGGCCAGGGCTGCAGTCCGGAGCACAGGGCTGCTGGCGACGCTGGACACTGCCTTC
CAGACCCCCGACTTTGGGGTTCTGGAGCACTCTGGGCTGGGCCTTCACCAACCCGTGCTGCGCAGGGCTG
GTGCTGTTCCTTGGCTGCAGCATCCCCATGGTGCTGTCTGCCTTCATGTTCCTCTACTACCCGCCCCTGG
ACATCGACATCTCCTACAACGCCTTTGAGATCCGCAACCACGAGGCATCACAGCGCTTTGACGCCCTGGC
CTTGGCCCTCAAGTCCCAGTTTGGATCTTGGGGGCGCAACAGGCGCGACCTGGCGGACTTCACCTCCGAG
ACGTTGCAGCGCCTCATCTCAGAGCAGCTTCAGCAGCTGCACCTGGGGAATCATTCTCGACCTGCATCCC
GAGCTCCTCGCTCAGCACCGAGGGACACTGTTGCCACTCAGACATCAGCAGCCAATTCGAGTGAGCGACG
TCGCCGGGAGGCTCCGTCCCCGGAGGGTCAGGTAACCAATCAGAGCCGGGCCCGTCGGGGCGCCTCGCGC
TGGGATTACTCGCGCACCTATGTGAGCGCCAACACCCAAACACACGCGCATTGGCGAATCGAGCTCATCT
TTCTGGCTCGCGGAGACGCGGAGCGCAACATTTTCACGAGCGAGCGTCTAGTCACGATCCACGAGATCGA
GCGTAAAATCATGGACCACCCGGGTTTCCGGGAGTTCTGCTGGAAGCCCCATGAGGTGCTCAAGGACCTG
CCGCTCGGATCCTATTCCTACTGCTCCCCGCCTAGTTCTCTCATGACTTACTTTTTCCCCACCGAGAGGG
GCGGCAAGATCTACTACGACGGCATGGGCCAGGACCTGGCGGATATCCGGGGCTCCCTAGAACTGGCCAT
GACTCACCCTGAGTTCTACTGGTATGTGGATGAGGGGCTCTCCGTGGATAATCTGAAGAGCTCCCTCCTG
CGCAGTGAGATCCTGTTTGGAGCGCCGCTTCCCAACTACTACTCAGTGGATGATCGCTGGGAGGAGCAGA
GAGCCAAGTTTCAGAGCTTCGTAGTCACGTATGTGGCCATGCTCGCCAAGCAGTCCACTAGCAAAGTCCA
GGTCCTCTATGGGGGGACAGACCTCTTCGACTATGAGGTACGCCGAACCTTCAATAACGACATGCTCCTT
GCCTTCATTAGCAGTAGCTGCATCGCGGCCCTCGTCTACATCCTAACCTCCTGCTCAGTGTTCCTGTCCT
TCTTTGGGATCGCCAGCATCGGTCTCAGCTGCCTGGTGGCACTCTTTCTCTACCACGTGGTCTTTGGCAT
CCAGTACTTGGGCATCCTCAATGGAGTGGCCGCCTTTGTGATTGTGGGCATTGGTGTGGACGATGTCTTT
GTATTCATCAACACTTACCGCCAGGCCACCCACCTGGAAGACCCCCAACTGCGGATGATCCACACCATCC
AGACTGCAGGCAAAGCCACCTTCTTCACCTCGCTGACCACCGCCGCCGCTTATGCGGCCAACGTCTTCTC
CCAGATCCCAGCTGTGCATGACTTCGGCTTGTTCATGTCCCTCATTGTGACCTGCTGCTGGCTGGCTGTG
CTGTTCACCATGCCTGCGGCCCTGGGCCTCTGGAGCCTCTACATGGCGCCCCTGGAGAGCTCCTGCCAGA
ACAGCTGCCACCAGAAGTGCGGCCGCAAGAGCTCCTTGCATTTTCCTGGGGACCTGTTCACGGCTCCGGA
GCGGGCTGGGGGTGGCCCTGCTCAGGGTCCCCTCCCCTATCTGGATGATGATATCCCCTTGTTGAATGTG
GAGGATGAGCCAGCGTCCCTAGAGCTGGGAGATGTGTCACTGGTCTCTGTGCACTGTGAGGGTTTGCAGC
CCACCCCTGATGCAAACAGCAGGGGCCAGCTCCTCGCCCAGCTGCAAGAGCTGCTGCACCACTGGGTCTT
ATGGGCAGCCGTCAAGAGCCGCTGGGTGATCGTAGGGCTTTTCGCCTCCATCCTTATCCTGTCCCTGGTG
TTCGCCAGCCGGCTCCGCCCTGCCAGCCGGGCCCCACTCCTCTTCCGGCCGGACACCAACATTCAGGTGC
TACTGGACCTCAAGTACAACCTGAGCGCCGAGGGGATATCCTGCATCACCTGCTCAGGTCTGTTCCAGGA
GAAGCCCCACAGCCTGCAGAACAATGTCAGGACATCCCTGGAGAAGAAGAAGCGAGGTTCTGGGGTTTCC
TGGGCCAGCCGCACTGAGACCACTGCACAGGAGTCCATGAGCACCGTGTACATCTCCAAAGTGAAGAGCA
AAGGCCACCCAGCGGTCTACCGGCTCTCTCTCAATGCCAGCCTACCAGCACCCTGGCAAGCTGTGTCCCC
TGGAGATGGAGAGGTGCCCTCCTTCCAGGTGTATAGAGCGCCTTTTGGTGACTTCACCAAGAAGCTGACC
GCTTGTATGTCTACAGTAGGGCTGCTTCAGGCGGCGAGCCCCTCCCGCAAGTGGATGGTGACGGCCTTGG
CCTGTGACGCCCGGAGGGGCTGGAAGTTTGACTTCAGCTTTTACGTGGCCACCAAGGAGCAACAGCACAC
TCGGAAGCTGTACTTTGCTCAGTCCCACAAGCCCCCCTTCCACGGGCGCCTGTGTGTGGCGCCACCTGGG
TGCTTGCTCAGCTCCAGCCCTGATGGGCCCACCAAAGGCTTCTTCTATGTGCCTAGTGACAAAGTACCCA
AGGCCCGCATCTCTGCCACCTTTGGCTTCAACCCTTGTGTGAACACGGGCTGTGGGAAGCCTGCGGTGCG
TCCGCTGGTGGACACAGGAGCCATGGTCTTCGTGGTGTTTGGCATCATTGGACTCAACCGCACCCAACAG
ATGGACAACCACGTTATCGGGGACCCGGGCAGCGTCATCTACGACAGCAGCTTTGACCTCTTCAAAGAGA
TCGGGCACCTGTGTCGCCTCTGCAAGGCCATCGCGGGCAACTCGGAGCTAGTGAAGCCAGGCGGGGCCCA
GTGCTTGCCATCAGGATACAGCATCTCTTCCTTCCTGCAGATGTTGCACCCCGAGTGCAAGGAGCTGCCT
GAGCCCAACCTGCTGCCAGGGCAGCTATCCCACGGGGCAGTGGGTGTCAAAGAGGGCCGTGTGCAGTGGA
TCTCCATGGCCTTTGAGTCGACCACATACAAGGGCAAGTCCTCCTTCCAGACCTACTCAGACTACTTGCG
TTGGGAGAGCTTCCTCCGGCAGCAGCTGCAGACATTCCCCGAGGGCTCAGCCCTGCACCGAGGCTTCCAG
ACCTGTGAGCACTGGAAGCAGATCTTCATGGAGATCATAGGGGTACAGAGTGCCCTGTATGGCCTGGTCC
TCTCTCTACTCATCTGTGTGGCTGCGGTGGCCGTGTTCACCACCCATGTCCTCCTGCTGCTGCCTGTGCT
CCTGAGTATCCTAGGCATCGTCTGCCTCGTGGTGACCATCATGTACTGGAGCGGCTGGGAGATGGGTGCT
GTGGAGGCTATCTCCCTGTCCATCCTGGTTGGCTCCTCTGTGGATTACTGTGTCCATCTGGTAGAAGGCT
ACTTGCTGGCTGGGGAGAACCTACCCCCACAGCAGGCTGAGGATCCCAGCTCTCAGCGCCAGTGGAGGAC
CCTCGAGGCTGTCCGGCATGTAGGCGTGGCCATCGTGTCCAGTGCGCTCACCACCGTCATTGCCACCGTC
CCACTCTTCTTCTGCATCATCGCCCCGTTCGCCAAGTTCGGGAAGATCGTGGCACTCAACACAGGCGTGT
CCATCCTCTACACTCTCACCGTCAGCACCGCCCTGCTGGGCATCATGGCTCCCGGTTCCTTCACCCGGAC
CAGGACTTCCTTTCTTAAGGCCCTGGGTGCTGTGCTGCTGGCAGGAGCCCTAGGACTGGGTGCCTGTCTT
GTGCTCCTGCGCAGTGGCTACAAGATCCCCCTGCCCAGCGGGGCCACGCTATAG

Translation (1347 aa):
MDSEDDPLLQDVWLEEEQPEDEACRGIPGPGLQSGAQGCWRRWTLPSRPPTLGFWSTLGWAFTNPCCAGL
VLFLGCSIPMVLSAFMFLYYPPLDIDISYNAFEIRNHEASQRFDALALALKSQFGSWGRNRRDLADFTSE
TLQRLISEQLQQLHLGNHSRPASRAPRSAPRDTVATQTSAANSSERRRREAPSPEGQVTNQSRARRGASR
WDYSRTYVSANTQTHAHWRIELIFLARGDAERNIFTSERLVTIHEIERKIMDHPGFREFCWKPHEVLKDL
PLGSYSYCSPPSSLMTYFFPTERGGKIYYDGMGQDLADIRGSLELAMTHPEFYWYVDEGLSVDNLKSSLL
RSEILFGAPLPNYYSVDDRWEEQRAKFQSFVVTYVAMLAKQSTSKVQVLYGGTDLFDYEVRRTFNNDMLL
AFISSSCIAALVYILTSCSVFLSFFGIASIGLSCLVALFLYHVVFGIQYLGILNGVAAFVIVGIGVDDVF
VFINTYRQATHLEDPQLRMIHTIQTAGKATFFTSLTTAAAYAANVFSQIPAVHDFGLFMSLIVTCCWLAV
LFTMPAALGLWSLYMAPLESSCQNSCHQKCGRKSSLHFPGDLFTAPERAGGGPAQGPLPYLDDDIPLLNV
EDEPASLELGDVSLVSVHCEGLQPTPDANSRGQLLAQLQELLHHWVLWAAVKSRWVIVGLFASILILSLV
FASRLRPASRAPLLFRPDTNIQVLLDLKYNLSAEGISCITCSGLFQEKPHSLQNNVRTSLEKKKRGSGVS
WASRTETTAQESMSTVYISKVKSKGHPAVYRLSLNASLPAPWQAVSPGDGEVPSFQVYRAPFGDFTKKLT
ACMSTVGLLQAASPSRKWMVTALACDARRGWKFDFSFYVATKEQQHTRKLYFAQSHKPPFHGRLCVAPPG
CLLSSSPDGPTKGFFYVPSDKVPKARISATFGFNPCVNTGCGKPAVRPLVDTGAMVFVVFGIIGLNRTQQ
MDNHVIGDPGSVIYDSSFDLFKEIGHLCRLCKAIAGNSELVKPGGAQCLPSGYSISSFLQMLHPECKELP
EPNLLPGQLSHGAVGVKEGRVQWISMAFESTTYKGKSSFQTYSDYLRWESFLRQQLQTFPEGSALHRGFQ
TCEHWKQIFMEIIGVQSALYGLVLSLLICVAAVAVFTTHVLLLLPVLLSILGIVCLVVTIMYWSGWEMGA
VEAISLSILVGSSVDYCVHLVEGYLLAGENLPPQQAEDPSSQRQWRTLEAVRHVGVAIVSSALTTVIATV
PLFFCIIAPFAKFGKIVALNTGVSILYTLTVSTALLGIMAPGSFTRTRTSFLKALGAVLLAGALGLGACL
VLLRSGYKIPLPSGATL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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