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Report for CCDS90214.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90214.1 Public Mus musculus 7 Zfp788 23 108 98 CCDS HistoryNCBI Gene:67607Re-query CCDS DB by CCDS ID:90214.1Re-query CCDS DB by GeneID:67607See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90214.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098508.8 ENSMUSP00000096108.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098508.8Link to Ensembl Protein Viewer:ENSMUSP00000096108.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000098508Re-query CCDS DB by Protein ID:ENSMUSP00000096108
Original member Current member NCBI NM_001360674.1 NP_001347603.1 Accepted alive Link to Nucleotide Sequence:NM_001360674.1Link to Protein Sequence:NP_001347603.1Re-query CCDS DB by Nucleotide ID:NM_001360674Re-query CCDS DB by Protein ID:NP_001347603Link to BLAST:NP_001347603.1
Original member Current member NCBI NM_001360675.1 NP_001347604.1 Accepted alive Link to Nucleotide Sequence:NM_001360675.1Link to Protein Sequence:NP_001347604.1Re-query CCDS DB by Nucleotide ID:NM_001360675Re-query CCDS DB by Protein ID:NP_001347604Link to BLAST:NP_001347604.1

Chromosomal Locations for CCDS 90214.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 41643370 41643432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 41647491 41647617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 41647819 41647879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 41648193 41650596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2655 nt):
ATGTCAAGAGAAGGGTCTCAAGACACACCTGGCCTGGGTGGTATAACATTGGTTGCTGTCGAGGATTTAG
TTGTCTTTGAGGATGTGGCTGTGAACTTCACCGAGGAAGAGTGGGCTTTGCTGGATTCTTCTCAGAAGCA
TCTGTACAGAGATGTAATGCTGGAAATCTACAATAACCTTGCTTGTGTCGGAAACAAATGGGAAGACCAA
AGCATGGAAGATGAGCACACAAATCCTAGGAGAAGTCAAAGAATATGTAAGTTTGAGAGACTCTATGAGA
GTACTGAAGGTGATCAATCTGGAGAAATCTTCACCAAGACACCAACTCTGACAAACATCTTCCCTGGTCT
AAAATCTGAGCTTGATGAAAGTGGCGGGATGCAATATAAATGTGAACAGACTTGGAAAACAGACCTGAAT
TCTGTTACAAGTATTCCAATATATACACAAAATCTCAGTATGAGTAGGTCTTATAACGTTTGTGCCACAT
CCTTTGGTTTTCCCAGCTCATTTGGAAGATATCAAGAAACTCCTGTTGGAGAACAGCACTGTGAACAGAA
GGTAAAAAACTGTCCTTCAGCTAAATCATTTTACATCCATGAAATGAATGACAATGCAGACATCGATAAT
GAACACAAACCATTTGGTAGAGCTCCGAGCTCTTTTGGTTCCTGTGAAAGTCGTGGAAGAATTAATACAA
GGAAAAAGCCCTATGAATGTAGGCTGTGTAGTAAATCTTTCATGTATCCTTCTTTACTTCAAAAACATGA
AATAACTCATTCCAATGAAAAACCCTACGGGTGCCTACAGTGTGGTAAAGCTTTCAGAAATTTCAGTTCT
CTTCAAAAACATAAAATAGCTCATACTGAGGAAAAGCCTTATAAATGTCATTATTGTAATAAAGTGTTCA
TCTGTCAGGGATCACTTCAGTCACATATAAGAGTTCACACTGGGGAAAAGCCTTACGAATGTAAACAGTG
TGGGAAAGCCTTTAGAGTTAACAGTTCCTTTTGGCGCCATAAAAAAGTTCATACTGGGGAAAAGCCCTAT
GAATGTAAACAATGTGGTAAGTCCTTTATTTATCCTTCTCTACTTCAAACACATGAAAGAACTCACAGTG
CAGAAAAGCCCTATAGCTGTAAACAATGTGGTAAGGCCTTTAAATCTCACAGTTCCCTTCGAGTCCACGA
AAGAAACCATACTGGGAAAAAGCCCTATGAATGTAAACAATGTGGCAGGTCCTTTATTTATCCCTGCTTA
CTCCAGATTCATGAACGAACTCACAGTGGTGTGAAACCCTACGGATGTAAACAGTGTGGGAAAGCGTTCA
GGCGCCTCAGTGACCTTCGAGTCCATGAAAGAACTCATACCGGGGAAAAACCTTATGAATGTAAGCAGTG
CGCTAAATCTTTTATTAATCGGTATTTGCTTAAAATGCATCAAAAGTCTCATACTGGCGAGAAACCCTAT
AAGTGTAAGATTTGCAGCAAAGCCTTCGTTTATCCCTCCTTACTTAAATTGCATGAGAGATCTCACACTG
GGGAAAAGCCCTATCCATGTAAACAATGTGATAAAGCCTTCATTTTTCCCTCCTTACTTAAACTGCATGA
AAGAACTCACACTGGGGAAAAACCCTATGCCTGTAAACAGTGTGGTGAAGCCTTCAAAAGTTACAACTCC
CTTCAGAGACATAAAAGAATTCATACTGACGTAAAGGCTTATGTATGTAAACACTGTAGCAAAGCCTTCA
TATGCCAGAGGTCCCTTCAGTTACATAATAGAACTCATACCGGAGAAAAACCATATAAATGTGAACAGTG
TGGTAACTCCTTCAGATATCACAATTCCCTTCAAAGACATAAAATAATTCACACTGGGAAAAACCTCTAT
GAATGTAAACAGTGTGACAGGTCCTTCATTTATCCATATTTACTCCAAATACATGATAGAACGCACTCTG
GGGGAAAACCATATGAATGTACACAGTGTGGTAAGTCCTATATTTATCCTTCTCTACTTCGAATACATGA
AAGGACTCACAGTGCAGAAAAACCCTATAGCTGTAAACAATGTGGTAAGGCCTTTAAATCTCACAGTTCC
CTTCGGGTCCATGAAAGAAACCATACTGGGGAAAAGCCCTATGAATGTAAACAATGTGGCAGGTCCTTTA
TTTATCCTTGCTTACTCCAGACCCATGAAAGAATTCACAGTGGTGTGAAACCCTACGAATGTAAACAGTG
TGGGAAAGCCTTTAGAGGTCATAGTTCCTTTCGGGTCCATAAAAAACTTCACAGTGGGGAAAAGCCCTAT
GAATGCAAACAATGTGGTAAGTGCTTCATTTATCCATCCTTACTTCGAATGCATGAAAGAACTCATAGTA
GTGAAAAACCCTATGATTGTAAACAATGTGGTAAGGCCTTTAAATCTCGTAGTTCCCTCCGAGAACATGA
AAGAAACCATATTGAGGAAAAATCCTATCAGTGTCAACAGTGTGGTAAAATCTTCAGACGTTATAGTTCA
TTTCAAAACCATAAACAAATCCATGCTATACAAAAACTCAATGAATGCAAACAATGTGGTAAGATCTTCA
TTTATCCTTCTTTTCTTCAGAGGCATGAAAGAACTCACATTTGTGAAAGAACCCTATGTATGTAA

Translation (884 aa):
MSREGSQDTPGLGGITLVAVEDLVVFEDVAVNFTEEEWALLDSSQKHLYRDVMLEIYNNLACVGNKWEDQ
SMEDEHTNPRRSQRICKFERLYESTEGDQSGEIFTKTPTLTNIFPGLKSELDESGGMQYKCEQTWKTDLN
SVTSIPIYTQNLSMSRSYNVCATSFGFPSSFGRYQETPVGEQHCEQKVKNCPSAKSFYIHEMNDNADIDN
EHKPFGRAPSSFGSCESRGRINTRKKPYECRLCSKSFMYPSLLQKHEITHSNEKPYGCLQCGKAFRNFSS
LQKHKIAHTEEKPYKCHYCNKVFICQGSLQSHIRVHTGEKPYECKQCGKAFRVNSSFWRHKKVHTGEKPY
ECKQCGKSFIYPSLLQTHERTHSAEKPYSCKQCGKAFKSHSSLRVHERNHTGKKPYECKQCGRSFIYPCL
LQIHERTHSGVKPYGCKQCGKAFRRLSDLRVHERTHTGEKPYECKQCAKSFINRYLLKMHQKSHTGEKPY
KCKICSKAFVYPSLLKLHERSHTGEKPYPCKQCDKAFIFPSLLKLHERTHTGEKPYACKQCGEAFKSYNS
LQRHKRIHTDVKAYVCKHCSKAFICQRSLQLHNRTHTGEKPYKCEQCGNSFRYHNSLQRHKIIHTGKNLY
ECKQCDRSFIYPYLLQIHDRTHSGGKPYECTQCGKSYIYPSLLRIHERTHSAEKPYSCKQCGKAFKSHSS
LRVHERNHTGEKPYECKQCGRSFIYPCLLQTHERIHSGVKPYECKQCGKAFRGHSSFRVHKKLHSGEKPY
ECKQCGKCFIYPSLLRMHERTHSSEKPYDCKQCGKAFKSRSSLREHERNHIEEKSYQCQQCGKIFRRYSS
FQNHKQIHAIQKLNECKQCGKIFIYPSFLQRHERTHICERTLCM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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