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Report for CCDS21442.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21442.1 Public Mus musculus 7 Prss23 23 108 98 CCDS HistoryNCBI Gene:76453Re-query CCDS DB by CCDS ID:21442.1Re-query CCDS DB by GeneID:76453See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21442.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000041761.6 ENSMUSP00000045191.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000041761.6Link to Ensembl Protein Viewer:ENSMUSP00000045191.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000041761Re-query CCDS DB by Protein ID:ENSMUSP00000045191
Original member Current member EBI ENSMUST00000207932.1 ENSMUSP00000147183.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000207932.1Link to Ensembl Protein Viewer:ENSMUSP00000147183.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000207932Re-query CCDS DB by Protein ID:ENSMUSP00000147183
Original member NCBI NM_001360755.1 NP_001347684.1 Updated not alive Link to Nucleotide Sequence:NM_001360755.1Link to Protein Sequence:NP_001347684.1Re-query CCDS DB by Nucleotide ID:NM_001360755Re-query CCDS DB by Protein ID:NP_001347684
Current member NCBI NM_001360755.2 NP_001347684.1 Accepted alive Link to Nucleotide Sequence:NM_001360755.2Link to Protein Sequence:NP_001347684.1Re-query CCDS DB by Nucleotide ID:NM_001360755Re-query CCDS DB by Protein ID:NP_001347684Link to BLAST:NP_001347684.1
Original member NCBI NM_001360756.1 NP_001347685.1 Updated not alive Link to Nucleotide Sequence:NM_001360756.1Link to Protein Sequence:NP_001347685.1Re-query CCDS DB by Nucleotide ID:NM_001360756Re-query CCDS DB by Protein ID:NP_001347685
Current member NCBI NM_001360756.2 NP_001347685.1 Accepted alive Link to Nucleotide Sequence:NM_001360756.2Link to Protein Sequence:NP_001347685.1Re-query CCDS DB by Nucleotide ID:NM_001360756Re-query CCDS DB by Protein ID:NP_001347685Link to BLAST:NP_001347685.1
Original member NCBI NM_029614.4 NP_083890.2 Updated not alive Link to Nucleotide Sequence:NM_029614.4Link to Protein Sequence:NP_083890.2Re-query CCDS DB by Nucleotide ID:NM_029614Re-query CCDS DB by Protein ID:NP_083890
Current member NCBI NM_029614.5 NP_083890.2 Accepted alive Link to Nucleotide Sequence:NM_029614.5Link to Protein Sequence:NP_083890.2Re-query CCDS DB by Nucleotide ID:NM_029614Re-query CCDS DB by Protein ID:NP_083890Link to BLAST:NP_083890.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001347684.1 382 Q9D6X6 382 100% 0 0
NP_001347685.1 382 Q9D6X6 382 100% 0 0
NP_083890.2 382 Q9D6X6 382 100% 0 0

Chromosomal Locations for CCDS 21442.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 89509711 89510859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1149 nt):
ATGGCTGGAATCCCGGGGCTCTTCATCCTTCTTGTCCTGCTCTGTGTGTTCATGCAGGTGAGTCCCTACA
CCGTTCCGTGGAAACCCACATGGCCGGCTTATCGCCTCCCTGTAGTCTTGCCTCAGTCTACCCTCAACTT
AGCTAAGGCAGACTTCGACGCCAAAGCGAAATTGGAGGTGTCCTCCTCATGTGGACCTCAGTGTCACAAG
GGAACACCACTGCCCACCTACGAAGAGGCCAAGCAGTACCTTTCCTATGAAACCCTTTATGCCAATGGCA
GCCGCACAGAGACTCGGGTGGGCATCTACATCCTCAGCAATGGTGAAGGCAGGGCACGAGGCAGAGACTC
GGAGGCCACAGGGAGATCTCGCAGGAAGAGGCAGATTTATGGCTACGATGGCAGGTTTAGCATTTTTGGG
AAGGACTTCCTGCTCAATTATCCTTTCTCAACATCGGTGAAGTTGTCTACTGGCTGCACTGGCACCCTGG
TGGCAGAGAAGCACGTCCTCACTGCTGCCCACTGCATACACGATGGGAAAACCTATGTGAAAGGGACACA
GAAACTCCGAGTGGGCTTCCTGAAGCCCAAGTATAAAGATGGTGCCGGAGGGGACAACAGCTCGAGCTCA
GCCATGCCAGACAAGATGAAGTTTCAGTGGATCCGCGTGAAACGCACCCATGTGCCCAAGGGGTGGATCA
AGGGCAATGCCAATGACATCGGCATGGATTATGACTACGCCCTGCTGGAACTCAAGAAACCCCACAAAAG
ACAGTTCATGAAGATTGGTGTGAGTCCTCCAGCGAAGCAGCTCCCAGGGGGCAGGATCCACTTCTCTGGT
TATGACAATGACCGGCCCGGCAATTTGGTGTACCGCTTCTGTGATGTCAAAGATGAGACCTACGACCTTC
TCTACCAGCAGTGTGACGCCCAGCCCGGGGCCAGTGGTTCAGGGGTCTATGTGAGGATGTGGAAGAGACC
ACAGCAGAAATGGGAAAGAAAAATTATCGGCATCTTTTCAGGGCACCAGTGGGTGGACATGAATGGCTCT
CCACAGGATTTCAACGTGGCAGTTAGAATCACGCCTCTTAAATATGCCCAGATTTGCTATTGGATTAAAG
GAAACTACCTAGATTGCAGGGAGGGGTGA

Translation (382 aa):
MAGIPGLFILLVLLCVFMQVSPYTVPWKPTWPAYRLPVVLPQSTLNLAKADFDAKAKLEVSSSCGPQCHK
GTPLPTYEEAKQYLSYETLYANGSRTETRVGIYILSNGEGRARGRDSEATGRSRRKRQIYGYDGRFSIFG
KDFLLNYPFSTSVKLSTGCTGTLVAEKHVLTAAHCIHDGKTYVKGTQKLRVGFLKPKYKDGAGGDNSSSS
AMPDKMKFQWIRVKRTHVPKGWIKGNANDIGMDYDYALLELKKPHKRQFMKIGVSPPAKQLPGGRIHFSG
YDNDRPGNLVYRFCDVKDETYDLLYQQCDAQPGASGSGVYVRMWKRPQQKWERKIIGIFSGHQWVDMNGS
PQDFNVAVRITPLKYAQICYWIKGNYLDCREG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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