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Report for CCDS21141.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21141.1 Public Mus musculus 7 Kctd15 23 108 98 CCDS HistoryNCBI Gene:233107Re-query CCDS DB by CCDS ID:21141.1Re-query CCDS DB by GeneID:233107See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21141.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000032709.2 ENSMUSP00000032709.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032709.2Link to Ensembl Protein Viewer:ENSMUSP00000032709.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000032709Re-query CCDS DB by Protein ID:ENSMUSP00000032709
Original member Current member EBI ENSMUST00000108069.7 ENSMUSP00000103704.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108069.7Link to Ensembl Protein Viewer:ENSMUSP00000103704.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000108069Re-query CCDS DB by Protein ID:ENSMUSP00000103704
Original member Current member EBI ENSMUST00000108070.8 ENSMUSP00000103705.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108070.8Link to Ensembl Protein Viewer:ENSMUSP00000103705.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000108070Re-query CCDS DB by Protein ID:ENSMUSP00000103705
Original member NCBI NM_001360818.1 NP_001347747.1 Updated not alive Link to Nucleotide Sequence:NM_001360818.1Link to Protein Sequence:NP_001347747.1Re-query CCDS DB by Nucleotide ID:NM_001360818Re-query CCDS DB by Protein ID:NP_001347747
Current member NCBI NM_001360818.2 NP_001347747.1 Accepted alive Link to Nucleotide Sequence:NM_001360818.2Link to Protein Sequence:NP_001347747.1Re-query CCDS DB by Nucleotide ID:NM_001360818Re-query CCDS DB by Protein ID:NP_001347747Link to BLAST:NP_001347747.1
Original member NCBI NM_001360820.1 NP_001347749.1 Updated not alive Link to Nucleotide Sequence:NM_001360820.1Link to Protein Sequence:NP_001347749.1Re-query CCDS DB by Nucleotide ID:NM_001360820Re-query CCDS DB by Protein ID:NP_001347749
Current member NCBI NM_001360820.2 NP_001347749.1 Accepted alive Link to Nucleotide Sequence:NM_001360820.2Link to Protein Sequence:NP_001347749.1Re-query CCDS DB by Nucleotide ID:NM_001360820Re-query CCDS DB by Protein ID:NP_001347749Link to BLAST:NP_001347749.1
Original member Current member NCBI NM_146188.2 NP_666300.1 Accepted alive Link to Nucleotide Sequence:NM_146188.2Link to Protein Sequence:NP_666300.1Re-query CCDS DB by Nucleotide ID:NM_146188Re-query CCDS DB by Protein ID:NP_666300Link to BLAST:NP_666300.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001347747.1 283 Q8K0E1 283 100% 0 0
NP_001347749.1 283 Q8K0E1 283 100% 0 0
NP_666300.1 283 Q8K0E1 283 100% 0 0

Chromosomal Locations for CCDS 21141.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 34640291 34640449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 34641808 34642113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 34644838 34644982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 34649956 34650131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 34650747 34650812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (852 nt):
ATGCCTCACCGCAAGGAGCGGCCGAGCGGGTCCTCGCTTAACGCACACGGCAGCAGCGGCACGGCGGAGG
GAGGAAATATGTCCCGGCTGTCACTCACCCGGTCGCCTGTGTCTCCCCTGGCTGCCCAGGGGATCCCACT
GCCAGCTCAGCTCACCAAAGCCAACGCACCCGTGCACATCGATGTGGGAGGTCACATGTATACGAGCAGC
CTGGCCACACTCACCAAGTACCCTGACTCCAGAATAAGCCGTCTCTTCAACGGCACGGAGCCCATTGTCC
TAGACAGTCTCAAGCAACATTATTTCATCGACCGCGATGGGGAGATTTTCCGCTACATACTGAGTTTCCT
GCGGACGTCAAAACTGCTGCTTCCAGATGACTTCAAGGACTTCAACCTGCTGTATGAGGAGGCAAGGTAC
TACCAGCTGCAGCCCATGGTGCGTGAGCTGGAGCGCTGGCAGCAAGACCAAGAGCAAAGACGTCGCAGCC
GGGCCTGCGACTGCCTGGTGGTACGGGTCACCCCTGACTTGGGTGAACGGATCGCACTCAGTGGTGAGAA
GGCCCTCATTGAGGAGGTCTTCCCGGAGACTGGAGACGTCATGTGCAACTCTGTCAATGCTGGCTGGAAC
CAGGACCCCACACACGTCATCCGTTTCCCTCTCAACGGCTACTGTAGACTCAACTCAGTGCAGGTCCTAG
AAAGGCTGTTTCAGAGAGGGTTCAGCGTGGCCGCATCCTGCGGGGGTGGTGTGGACTCTTCCCAGTTCAG
CGAATATGTTCTTTGCCGGGAAGAGCGGCGACCACAGCCTACCCCAACTGCTGTCCGGATAAAGCAGGAG
CCCCTGGACTAG

Translation (283 aa):
MPHRKERPSGSSLNAHGSSGTAEGGNMSRLSLTRSPVSPLAAQGIPLPAQLTKANAPVHIDVGGHMYTSS
LATLTKYPDSRISRLFNGTEPIVLDSLKQHYFIDRDGEIFRYILSFLRTSKLLLPDDFKDFNLLYEEARY
YQLQPMVRELERWQQDQEQRRRSRACDCLVVRVTPDLGERIALSGEKALIEEVFPETGDVMCNSVNAGWN
QDPTHVIRFPLNGYCRLNSVQVLERLFQRGFSVAASCGGGVDSSQFSEYVLCREERRPQPTPTAVRIKQE
PLD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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