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Report for CCDS19255.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19255.1 Public Mus musculus 5 Drd5 23 108 98 CCDS HistoryNCBI Gene:13492Re-query CCDS DB by CCDS ID:19255.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19255.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000041646.3 ENSMUSP00000039691.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000041646.3Link to Ensembl Protein Viewer:ENSMUSP00000039691.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000041646Re-query CCDS DB by Protein ID:ENSMUSP00000039691
Original member NCBI NM_013503.3 NP_038531.1 Updated not alive Link to Nucleotide Sequence:NM_013503.3Link to Protein Sequence:NP_038531.1Re-query CCDS DB by Nucleotide ID:NM_013503Re-query CCDS DB by Protein ID:NP_038531
Current member NCBI NM_013503.4 NP_038531.1 Accepted alive Link to Nucleotide Sequence:NM_013503.4Link to Protein Sequence:NP_038531.1Re-query CCDS DB by Nucleotide ID:NM_013503Re-query CCDS DB by Protein ID:NP_038531Link to BLAST:NP_038531.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_038531.1 478 Q8BLD9 478 100% 0 0

Chromosomal Locations for CCDS 19255.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 38319666 38321102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1437 nt):
ATGCTGCCTCCTGGGCGCAATGGCACCGCACATCGGGCGCGGCTGGGGTTGCAGAGGCAACTGGCGCAGG
TGGACGCCCCCGGGGGCTCAGCAGCCCCACTGGGACCCGCGCAGGTGGTCACCGCTGGCCTCCTGACTCT
CTTAATCGTCTGGACCTTGCTCGGCAACGTCCTAGTGTGTGCTGCTATCGTCCGCAGCCGCCACCTGCGC
GCCAAAATGACCAACATCTTCATCGTATCTCTGGCCGTCTCAGACCTCTTCGTGGCATTGCTGGTCATGC
CTTGGAAGGCCGTGGCTGAGGTGGCCGGGTACTGGCCCTTTGGGGCATTCTGCGACATCTGGGTGGCCTT
TGACATCATGTGCTCCACTGCTTCCATCCTGAATCTGTGTATCATCAGCGTGGACCGGTACTGGGCTATT
TCCAGACCCTTCCGCTACGAGCGCAAGATGACCCAGCGTGTAGCCCTGGTCATGGTGGCCCTGGCCTGGA
CCTTGTCCATCCTCATCTCCTTTATCCCGGTCCAACTCAATTGGCACAGAGACAAGGCAGGCTCCCAGGG
CCGAGAGGGCCTGCTGTCCAATGAGACACCCTGGGAGGAAGGTTGGGAGCTAGACGGGAGAACAGAGAAC
TGTGACTCCAGCCTGAACCGAACCTACGCCATCTCCTCGTCGCTCATCAGCTTCTATATCCCGGTAGCCA
TCATGATAGTGACCTACACGCGCATCTACCGCATTGCACAGGTTCAGATCCGCCGTATCTCCTCCCTAGA
AAGGGCAGCTGAGCATGCTCAGAGTTGCCGGAGCCGTGGGGCCTGCGAACCTGACCCCAGCCTGCGAGCA
TCCATCAAGAAGGAGACCAAGGTCTTCAAAACCCTGTCCGTGATCATGGGGGTCTTCGTGTGCTGCTGGT
TGCCTTTCTTCATCCTGAACTGTATGGTTCCCTTCTGCAGCAGTGGAGATGCCCAGGGCCCAAGGACTGG
CTTCCCTTGTGTCAGCGAGACCACCTTCGACATATTCGTCTGGTTTGGCTGGGCCAACTCCTCTCTCAAC
CCCATCATCTATGCCTTTAATGCAGACTTCCGGAAGGTGTTCGCCCAGCTGCTGGGGTGCAGCCACCTCT
GCTTCCGGACCCCCGTGCAGACGGTAAACATCAGTAATGAACTTATTTCCTACAACCAAGACACGGTCTT
CCACAGGGAGATCGCTGCTGCCTATGTCCACATGATCCCAAATGCGGTGTCCTCCGGAGACAGGGAGGTG
GGAGAGGAGGAGGAGGCGGAGGAGGAGGGGCCTTTCGATCACATGTCTCAAATCTCTCCAACGACCCCAG
ATGGTGACCTGGCTGCTGAGTCTGTCTGGGAGCTTGACTGTGAGGAGGAGGTTTCCTTAGGCAAAATCTC
ACCACTCACCCCCAATTGTTTCCATAAAACTGCTTAG

Translation (478 aa):
MLPPGRNGTAHRARLGLQRQLAQVDAPGGSAAPLGPAQVVTAGLLTLLIVWTLLGNVLVCAAIVRSRHLR
AKMTNIFIVSLAVSDLFVALLVMPWKAVAEVAGYWPFGAFCDIWVAFDIMCSTASILNLCIISVDRYWAI
SRPFRYERKMTQRVALVMVALAWTLSILISFIPVQLNWHRDKAGSQGREGLLSNETPWEEGWELDGRTEN
CDSSLNRTYAISSSLISFYIPVAIMIVTYTRIYRIAQVQIRRISSLERAAEHAQSCRSRGACEPDPSLRA
SIKKETKVFKTLSVIMGVFVCCWLPFFILNCMVPFCSSGDAQGPRTGFPCVSETTFDIFVWFGWANSSLN
PIIYAFNADFRKVFAQLLGCSHLCFRTPVQTVNISNELISYNQDTVFHREIAAAYVHMIPNAVSSGDREV
GEEEEAEEEGPFDHMSQISPTTPDGDLAAESVWELDCEEEVSLGKISPLTPNCFHKTA


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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