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Report for CCDS4470.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4470.1 Public Homo sapiens 6 HUS1B 24 110 108 CCDS HistoryNCBI Gene:135458Re-query CCDS DB by CCDS ID:4470.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4470.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000380907.3 ENSP00000370293.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000380907.3Link to Ensembl Protein Viewer:ENSP00000370293.2Re-query CCDS DB by Nucleotide ID:ENST00000380907Re-query CCDS DB by Protein ID:ENSP00000370293
Original member Current member NCBI NM_148959.4 NP_683762.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_148959.4Link to Protein Sequence:NP_683762.2Re-query CCDS DB by Nucleotide ID:NM_148959Re-query CCDS DB by Protein ID:NP_683762Link to BLAST:NP_683762.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_683762.2 278 Q8NHY5 278 100% 0 0

Chromosomal Locations for CCDS 4470.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 656108 656944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (837 nt):
ATGAAGTTTCGCGCCAAGATCACCGGCAAAGGCTGTCTAGAGCTGTTCATTCACGTCAGCGGCACCGTCG
CGAGGCTAGCGAAGGTCTGCGTGCTCCGCGTGCGCCCTGACAGCCTGTGCTTCGGCCCCGCGGGTTCCGG
CGGCCTCCACGAGGCCAGGCTGTGGTGCGAGGTGCGGCAGGGGGCCTTCCAGCAGTTTCGCATGGAAGGT
GTCTCGGAAGATCTCGATGAGATCCACCTGGAGCTGACGGCGGAGCACCTGTCCCGGGCGGCGAGAAGCG
CAGCGGGCGCGTCCTCCCTGAAGCTGCAGCTGACCCACAAGCGCCGCCCCTCCCTCACGGTGGCGGTGGA
GCTGGTCTCGTCCCTGGGCCGCGCTCGCAGCGTGGTGCACGATCTGCCCGTGCGGGTGCTTCCCAGGAGA
GTGTGGCGGGACTGCCTGCCGCCCAGCCTGCGCGCCTCCGACGCGAGCATCCGCCTGCCGCGCTGGAGGA
CGCTGAGGAGCATCGTGGAGAGGATGGCGAACGTGGGCAGTCACGTGCTGGTGGAAGCAAACCTCAGTGG
CAGGATGACCCTGAGTATAGAGACGGAGGTGGTGTCCATTCAAAGTTATTTTAAAAATCTTGGAAACCCT
CCCCAGTCGGCTGTGGGTGTGCCTGAAAACAGAGACCTGGAGAGCATGGTGCAAGTGCGGGTGGACAATC
GGAAGCTTCTGCAGTTTTTGGAGGGACAGCAAATACATCCTACGACGGCCCTGTGCAATATTTGGGACAA
TACTCTTCTTCAGCTTGTTTTGGTTCAAGAAGATGTCTCTCTTCAGTATTTCATTCCTGCCTTGTAA

Translation (278 aa):
MKFRAKITGKGCLELFIHVSGTVARLAKVCVLRVRPDSLCFGPAGSGGLHEARLWCEVRQGAFQQFRMEG
VSEDLDEIHLELTAEHLSRAARSAAGASSLKLQLTHKRRPSLTVAVELVSSLGRARSVVHDLPVRVLPRR
VWRDCLPPSLRASDASIRLPRWRTLRSIVERMANVGSHVLVEANLSGRMTLSIETEVVSIQSYFKNLGNP
PQSAVGVPENRDLESMVQVRVDNRKLLQFLEGQQIHPTTALCNIWDNTLLQLVLVQEDVSLQYFIPAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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