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Report for CCDS26174.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26174.1 Public Mus musculus 12 Ankrd9 23 108 98 CCDS HistoryNCBI Gene:74251Re-query CCDS DB by CCDS ID:26174.1Re-query CCDS DB by GeneID:74251See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26174.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000043459.12 ENSMUSP00000048823.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000043459.12Link to Ensembl Protein Viewer:ENSMUSP00000048823.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000043459Re-query CCDS DB by Protein ID:ENSMUSP00000048823
Original member Current member EBI ENSMUST00000135131.1 ENSMUSP00000119339.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000135131.1Link to Ensembl Protein Viewer:ENSMUSP00000119339.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000135131Re-query CCDS DB by Protein ID:ENSMUSP00000119339
Original member Current member EBI ENSMUST00000128353.7 ENSMUSP00000120816.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000128353.7Link to Ensembl Protein Viewer:ENSMUSP00000120816.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000128353Re-query CCDS DB by Protein ID:ENSMUSP00000120816
Original member Current member EBI ENSMUST00000140788.7 ENSMUSP00000121279.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000140788.7Link to Ensembl Protein Viewer:ENSMUSP00000121279.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000140788Re-query CCDS DB by Protein ID:ENSMUSP00000121279
Original member Current member EBI ENSMUST00000148765.1 ENSMUSP00000123239.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000148765.1Link to Ensembl Protein Viewer:ENSMUSP00000123239.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000148765Re-query CCDS DB by Protein ID:ENSMUSP00000123239
Original member Current member NCBI NM_001361916.1 NP_001348845.1 Accepted alive Link to Nucleotide Sequence:NM_001361916.1Link to Protein Sequence:NP_001348845.1Re-query CCDS DB by Nucleotide ID:NM_001361916Re-query CCDS DB by Protein ID:NP_001348845Link to BLAST:NP_001348845.1
Original member Current member NCBI NM_001361917.1 NP_001348846.1 Accepted alive Link to Nucleotide Sequence:NM_001361917.1Link to Protein Sequence:NP_001348846.1Re-query CCDS DB by Nucleotide ID:NM_001361917Re-query CCDS DB by Protein ID:NP_001348846Link to BLAST:NP_001348846.1
Original member Current member NCBI NM_175207.5 NP_780416.2 Accepted alive Link to Nucleotide Sequence:NM_175207.5Link to Protein Sequence:NP_780416.2Re-query CCDS DB by Nucleotide ID:NM_175207Re-query CCDS DB by Protein ID:NP_780416Link to BLAST:NP_780416.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001348845.1 326 Q8BH83 326 100% 0 0
NP_001348846.1 326 Q8BH83 326 100% 0 0
NP_780416.2 326 Q8BH83 326 100% 0 0

Chromosomal Locations for CCDS 26174.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 110976519 110977499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (981 nt):
ATGCCGTGGGACACCAGGCCTGGACGCAGCGCCAACGGAGGGCCCGAGGGTCCCGGCGCAGCTCGCTTGC
GGGTGCAGAAGCAGTGCCGGAAGTCATCCTTCGCCTTCTACCTGGCAGTGCGAGATCAGCTGCCAGTTTG
GCTACTCGAGGACATACGTGCCAGCGAAGCCTTCCACTGTGATGAGCGGGGGCGCGCTGCGGCCTATTCG
CCTTCGGAGGCTCTGCTCTATGCGCTTGTGCACGACCACCAAGCCTATGCACACTACCTGCTAGCTACCT
TCCCGCGGTGTGCACTCGCCCCACCTAGCGCGGGCTTCCGCTGCTGCACCGCGCCTGGGCCTCACGTGGC
GCTGGCGGTGCGCTACAACCGCGTGGGCATCCTGCGGCGCATCCTGCGAACGGTGCAGGACTTCCCAGTG
GAAGAGCGCGTGCGCCTCCTCGACCGCCGTGGCTGCAGCCGCGTGGAGGGCGGTGGCACGTCGCTGCATG
TGGCCTGTGAGCTCGCACGCCCCGAGTGCCTCTTTCTGCTGCTTGGCCACGGAGCTTCTCCAGGCCTTCG
AGATGGCAGTGGCTTTACACCATTGGAGCTGCTGTTGCGCCAGCTGAACCAGGACGCCAGCTCAGCCCCC
ACTAAGGCTGAGGCAGCTTCTGCCACGGTCAATGCTGCCACCGCCAACACCACTTCGTCTGAGGAGGTGT
GTCAGCGCCGCCTGCTGCTGCTTGACCTGCTAGTACTGTACACCCCGGGGGGCGTCGTAGGTCCAGCTCG
ATGTGAACTGCTAGGAGACCAGCTACGCTGGCAGCGGTTGTTGGGTGAGGACAAGTTCCAGTGGCTGGCA
GGGCTGGCGCCACCCTCCCTCTTTGTCCGTGCCATGCAGGTGTTGGTCACCACTATCTCACCTGGCCGCT
TCCCGGAGGCCTTAGATGAACTGCCTCTGCCATCGTTTTTGCAGCCCTTGGACCTCACGGGCAAGGGCTA
G

Translation (326 aa):
MPWDTRPGRSANGGPEGPGAARLRVQKQCRKSSFAFYLAVRDQLPVWLLEDIRASEAFHCDERGRAAAYS
PSEALLYALVHDHQAYAHYLLATFPRCALAPPSAGFRCCTAPGPHVALAVRYNRVGILRRILRTVQDFPV
EERVRLLDRRGCSRVEGGGTSLHVACELARPECLFLLLGHGASPGLRDGSGFTPLELLLRQLNQDASSAP
TKAEAASATVNAATANTTSSEEVCQRRLLLLDLLVLYTPGGVVGPARCELLGDQLRWQRLLGEDKFQWLA
GLAPPSLFVRAMQVLVTTISPGRFPEALDELPLPSFLQPLDLTGKG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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