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Report for CCDS37952.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37952.1 Public Mus musculus 19 Ermp1 23 108 98 CCDS HistoryNCBI Gene:226090Re-query CCDS DB by CCDS ID:37952.1Re-query CCDS DB by GeneID:226090See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37952.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000159692.7 ENSMUSP00000124881.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000159692.7Link to Ensembl Protein Viewer:ENSMUSP00000124881.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000159692Re-query CCDS DB by Protein ID:ENSMUSP00000124881
Original member Current member NCBI NM_001081213.2 NP_001074682.1 Accepted alive Link to Nucleotide Sequence:NM_001081213.2Link to Protein Sequence:NP_001074682.1Re-query CCDS DB by Nucleotide ID:NM_001081213Re-query CCDS DB by Protein ID:NP_001074682Link to BLAST:NP_001074682.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074682.1 898 Q3UVK0-1 898 100% 0 0

Chromosomal Locations for CCDS 37952.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 29612515 29612679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 29612769 29612932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 29615723 29615838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 29616517 29616719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 29617818 29617970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 29623069 29623259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 29623641 29623815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 29626847 29627067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 29628604 29628816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 29631343 29631435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 29632391 29632537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 29637291 29637396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 29639857 29639984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 29645967 29646268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 29648036 29648355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2697 nt):
ATGGAGTGGAGCTCGGAGTCAGCGGCTGTGCGGCGGCACCGCGGCACCGCGGAGCGTCGGGAGGGAGAGG
CGGCCGCGTCGCACCGGCAGAGAGAGGCCTCAGCGCAGGAGGATGCGAAGGGCGTCGGGAGGATGTGGGG
GAAGACGGAGAACGGCGGCGGGAGCCGGGTTGCGAAGACCGCGCTGTCCGAGGCGCGCACGGCGCTGGCG
CTCGCACTCTACCTGCTCGCGCTGCGGGCGCTCGTGCAGCTCTCGCTGCAGCGGCTGGTGCTGAGCCGGA
CCTCGGGGCTCCAGGGCGAGTTCGACGCGCGCCAAGCCAGGGATTATCTGGAACACATAACGGCCATTGG
CCCCAGGACTACAGGAAGCACAGAAAATGAAATTCTGACGGTACAGTACCTTTTGGAGCAGATCAAGCTG
ATAGAAGCACAAAGCAACAGCCTTCACAGCATCTCCGTAGATATACAGCGGCCCACCGGTTCCTTTAGCA
TTGACTTCTTGGGGGGCTTCACGAGCTACTATGACAACATTACTAATGTCGTGGTAAAGCTGGAGCCCCG
GGATGGAGCCGAGTCTGCTATCCTGGCTAACTGTCACTTTGACTCAGTGGCAAATTCACCAGGTGCCAGT
GACGATGCAGTTAGCTGTGCAGTGATGCTCGAAGTTCTCCGGGTCATGTCAGCGTCTCCAGAGCCCATGC
AGCACGCTGTGGTGTTCCTCTTTAATGGCGCAGAGGAAAATGTCTTGCAAGCAAGCCATGGTTTTATTAC
TCAACATCCCTGGGCCAGTTTGATTCGAGCATTTATTAACCTGGAGGCTGCTGGTGTCGGAGGGAAAGAA
CTTGTGTTCCAAACAGGCCCTGAAAATCCTTGGTTGGTCCAGGCTTACGTTTCGGCAGCTAAACACCCTT
TTGCCTCTGTGGTGGCTCAGGAGGTTTTCCAGAGTGGGATCATTCCCTCTGACACCGACTTCAGAATCTA
CAGGGATTTTGGGAACATTCCAGGAATAGACTTAGCTTTTATTGAAAATGGATACATCTATCACACCAAG
TATGACACAGCGGACAGGATTCTCATAGATTCCATTCAGAGAGCAGGTGACAACATTTTAGCAGTTCTTA
AACACCTGGCTACGTCTGACACCCTGGCTTCTTCGTCTGAGTACCGGCATGGGAGCATGGTGTTCTTCGA
TGTGCTCGGCCTGCTGGTCATTGCGTACCCTTCTCGTGTCGGCTCCATAATCAACTACATGGTGGTCATG
GCCGTGGTTCTGTACCTGGGGAAGAAACTTCTGCGGCCCAAGCACAGGAATGCTAATTACATGAGAGACT
TCTTGTGTGGACTCGGGATCACATTCATTAGCTGGTTCACTAGCCTTGTTACCGTCCTCATTATAGCAGT
GTTCATCTCTCTCATTGGACAGTCTCTCTCATGGTATAACTACTTTTATATTGCCGTTTGCCTGTATGGA
ACTGCAACAGTCGCCAAAATCATATTCATTCATACTCTTGCAAAAAGATTTTATTATATGAATGCCAGCG
ACCTGTATCTGGGAGAACTGTTCTTCGACACCTCCCTGTTCGTGCACTGTGCTTTTCTTGTTGCTTTAAC
TTATCAAGGGTTTTGCTCTGCATTCATGAGTGCCGTCTGGGTAGTTTTTCCATTGCTCACAAAGCTTTGT
GTGTACAAGGACTTCAAGAAGCACGGTGCCCAAGGAAGATTTGTTGCTCTGTACCTTTTGGGGATGTTTA
TCCCATATCTTTACGGGCTCTACCTCATCTGGGCTGTGTTTGAGATGTTCACTCCTATCCTGGGAAGAAG
CGGGTCGGAGATCCCCCCCGACGTTGTGCTGGCCTCCATCCTGGCTGTCTGTGTGATGATCCTCTCTTCC
TATTTTATTACCTTCATCTACCTTGTGAACAGCACAAAGAAAACCATTCTGACTCTAATACTGGTGTGCG
CGGTCACCTTCCTCCTTGTCTGCAGTGGAGCCTTTTTCCCATATAGTTCTAATCCCGAGAGTCCAAAGCC
AAAGAGAGTGTTTCTTCAGCACGTGAGTAGAACTTTTCATAACTTAGAAGGAAGCGTAGTAAAAAGAGAC
TCTGGAATATGGATCAATGGGTTTGATTATACTGGAATGTCTCACGTAACACCTCACATTCCTGAGATCA
ACGACACAATCCGAGCTCACTGTGAGGAGGATGCCCCACTCTGTGGCTTCCCTTGGTATCTTCCAGTGCA
CTTCCTGATCAGGAAAAACTGGTATCTTCCAGCTCCCGAGGTCTCTCCAAGAAACCCTGCTCATTTCAGA
CTTGTGTCCAAAGAGAAAATGCCATGGGATTCGATAAAGTTGACCTTTGAAGCAACAGGACCAAGCCATA
TGTCTTTCTATGTTCGAACCCACAAAGGATCAACACTTTCCCAGTGGTCTCTTGGCAACGGCATCCCAGT
CACAAGCAGAGGAGGAGACTACTTTGTGTTTTATTCCCATGGACTCCAGGCTTCTGCATGGCGGTTCTGG
ATAGAAGTGCAGGTCTCAGAAGAACAGGCAGAAGGAATGGTGACTGTGGCCATTGCTGCCCACTATCTAT
CAGGGGAGAACAAAAGATCCTCTCAGCTGGATGCTCTGAAGAAGAAGTTCCCAGACTGGTCCTTTCCTTC
GGCGTGGGTTTCCACCTACAGTCTCTTTGTGTTTTAA

Translation (898 aa):
MEWSSESAAVRRHRGTAERREGEAAASHRQREASAQEDAKGVGRMWGKTENGGGSRVAKTALSEARTALA
LALYLLALRALVQLSLQRLVLSRTSGLQGEFDARQARDYLEHITAIGPRTTGSTENEILTVQYLLEQIKL
IEAQSNSLHSISVDIQRPTGSFSIDFLGGFTSYYDNITNVVVKLEPRDGAESAILANCHFDSVANSPGAS
DDAVSCAVMLEVLRVMSASPEPMQHAVVFLFNGAEENVLQASHGFITQHPWASLIRAFINLEAAGVGGKE
LVFQTGPENPWLVQAYVSAAKHPFASVVAQEVFQSGIIPSDTDFRIYRDFGNIPGIDLAFIENGYIYHTK
YDTADRILIDSIQRAGDNILAVLKHLATSDTLASSSEYRHGSMVFFDVLGLLVIAYPSRVGSIINYMVVM
AVVLYLGKKLLRPKHRNANYMRDFLCGLGITFISWFTSLVTVLIIAVFISLIGQSLSWYNYFYIAVCLYG
TATVAKIIFIHTLAKRFYYMNASDLYLGELFFDTSLFVHCAFLVALTYQGFCSAFMSAVWVVFPLLTKLC
VYKDFKKHGAQGRFVALYLLGMFIPYLYGLYLIWAVFEMFTPILGRSGSEIPPDVVLASILAVCVMILSS
YFITFIYLVNSTKKTILTLILVCAVTFLLVCSGAFFPYSSNPESPKPKRVFLQHVSRTFHNLEGSVVKRD
SGIWINGFDYTGMSHVTPHIPEINDTIRAHCEEDAPLCGFPWYLPVHFLIRKNWYLPAPEVSPRNPAHFR
LVSKEKMPWDSIKLTFEATGPSHMSFYVRTHKGSTLSQWSLGNGIPVTSRGGDYFVFYSHGLQASAWRFW
IEVQVSEEQAEGMVTVAIAAHYLSGENKRSSQLDALKKKFPDWSFPSAWVSTYSLFVF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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