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Report for CCDS35091.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35091.1 Public Homo sapiens 9 OR13C5 24 110 108 CCDS HistoryNCBI Gene:138799Re-query CCDS DB by CCDS ID:35091.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 35091.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374779.3 ENSP00000363911.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000374779.3Link to Ensembl Protein Viewer:ENSP00000363911.2Re-query CCDS DB by Nucleotide ID:ENST00000374779Re-query CCDS DB by Protein ID:ENSP00000363911
Original member Current member NCBI NM_001004482.1 NP_001004482.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004482.1Link to Protein Sequence:NP_001004482.1Re-query CCDS DB by Nucleotide ID:NM_001004482Re-query CCDS DB by Protein ID:NP_001004482Link to BLAST:NP_001004482.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004482.1 318 Q8NGS8 318 100% 0 0

Chromosomal Locations for CCDS 35091.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 104598457 104599413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (957 nt):
ATGGAATGGGAAAACCACACCATTCTGGTGGAATTTTTTCTGAAGGGACTTTCTGGTCACCCAAGACTTG
AGTTACTCTTTTTTGTGCTCATCTTCATAATGTATGTGGTCATCCTTCTGGGGAATGGTACTCTCATTTT
AATCAGCATCTTGGACCCTCACCTTCACACCCCTATGTACTTCTTTCTGGGGAACCTCTCCTTCTTGGAC
ATCTGCTACACCACCACCTCTATTCCCTCCACGCTAGTGAGCTTCCTTTCAGAAAGAAAGACCATTTCCC
TTTCTGGCTGTGCAGTGCAGATGTTCCTCAGCTTGGCCATGGGGACAACAGAGTGTGTGCTTCTGGGCGT
GATGGCCTTTGACCGCTATGTGGCTATCTGCAACCCTCTGAGATATCCCATCATCATGAGTAAGGATGCC
TATGTACCCATGGCAGCTGGGTCCTGGATCATAGGAGCTGTCAATTCTGCAGTACAAACAGTGTTTGTGG
TACAATTGCCTTTCTGCAGGAATAACATCATCAATCATTTCACCTGTGAAATTCTAGCTGTCATGAAACT
GGCCTGTGCTGACATCTCAGGCAATGAGTTCATCCTGCTTGTGACCACAACATTGTTCCTATTGACACCT
TTGTTATTAATTATTGTCTCTTACACGTTAATCATTTTGAGCATCTTCAAAATTAGCTCTTCGGAGGGGA
GAAGCAAACCTTCCTCTACCTGCTCAGCTCGTCTGACTGTGGTGATAACATTCTGTGGGACCATCTTCCT
CATGTACATGAAGCCCAAGTCTCAAGAGACACTTAATTCAGATGACTTGGATGCCACTGACAAACTTATA
TTCATATTCTACAGGGTGATGACTCCCATGATGAATCCTTTAATCTACAGTCTTAGAAACAAGGATGTGA
AGGAGGCAGTAAAACACCTACTGAGAAGAAAAAATTTTAACAAGTAA

Translation (318 aa):
MEWENHTILVEFFLKGLSGHPRLELLFFVLIFIMYVVILLGNGTLILISILDPHLHTPMYFFLGNLSFLD
ICYTTTSIPSTLVSFLSERKTISLSGCAVQMFLSLAMGTTECVLLGVMAFDRYVAICNPLRYPIIMSKDA
YVPMAAGSWIIGAVNSAVQTVFVVQLPFCRNNIINHFTCEILAVMKLACADISGNEFILLVTTTLFLLTP
LLLIIVSYTLIILSIFKISSSEGRSKPSSTCSARLTVVITFCGTIFLMYMKPKSQETLNSDDLDATDKLI
FIFYRVMTPMMNPLIYSLRNKDVKEAVKHLLRRKNFNK


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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