NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS90367.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90367.1 Public Mus musculus 8 Camsap3 23 108 98 CCDS HistoryNCBI Gene:69697Re-query CCDS DB by CCDS ID:90367.1Re-query CCDS DB by GeneID:69697See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90367.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000207712.1 ENSMUSP00000146565.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000207712.1Link to Ensembl Protein Viewer:ENSMUSP00000146565.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000207712Re-query CCDS DB by Protein ID:ENSMUSP00000146565
Original member Current member NCBI NM_001363248.1 NP_001350177.1 Accepted alive Link to Nucleotide Sequence:NM_001363248.1Link to Protein Sequence:NP_001350177.1Re-query CCDS DB by Nucleotide ID:NM_001363248Re-query CCDS DB by Protein ID:NP_001350177Link to BLAST:NP_001350177.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001350177.1 837 Q80VC9-13 837 100% 0 0

Chromosomal Locations for CCDS 90367.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 3587812 3587959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3597842 3598095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3598686 3598808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3598893 3598988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3600676 3600814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3601966 3602105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3602186 3602279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3602368 3602425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3602554 3602627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3603432 3603501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3604854 3605076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3606267 3606406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3606504 3606820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3607791 3607890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3608189 3608301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3608394 3608512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 3608598 3608903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2514 nt):
ATGGTGGAAGCGGCGCCCGCAGGGTCCGGGCCACTGCGGAGGACTTTCCTGGTCCCCGAGATCAAGTCTT
TGGACCAGTACGATTTCTCTCGAGCCAAGGCGGCGGCGAGTCTGGCGTGGGTGCTGCGGGCCGCATTCGG
GGGAGCAGAGCATGTGCCTCCGGAGCTGTGGGAACCCTTCTACACCGATCAGTACGCACAGGAGCACGTG
AAGCCCCCAGTGACGCGGCTGCTGCTCTCTGCGGAACTATACTGTCGGGCCTGGCGCCAGGCACTGCCAC
AGCTCGAGCCATCCCCCAGTCCCTCTGCTCTGTTGGCCTTGCTGGCGAGGAGGGGCACGGTGCCTTCACT
GCCTGAGCACCCAGTGCGCGAGGCTGACCTGAAACACCAGCCAATTCTCATGGGAGCCCACCTAGCTGTC
ATCGATGCTCTCATGGTTGCCTTCTCATTTGAGTGGACAAAGACACTACCTGGTCCCTTGGCTCTGAGCA
GCTTGGAGCACAAACTCCTTTTCTGGGTAGACACAACTGTTCGGCGGCTGCAGGAGAAGACAGAACAAGA
AGCAGCCCAGCGTGCATCTCCTGCAGCCCCTCTGGATGGGGCCTCTCCTGCCCAGCCCTCGATTCGATAT
CGCAAGGACCGTGCCATTGCCCGAAGGGCTCCCTGCTTTCCAAATGTGACTACCCTTCAGGACCTGGCCA
GTGGGGCAGCACTGGCTGCCACCATCCACTGCTATTGTCCCCAGCTATTACGACTTGAGGAGGTGTGCCT
CAAGGACCCCATGTCTGTGGCAGACAGTCTATACAACCTCCAGCTGGTGCAAGACTTCTGTGCCTCCCAT
CTTCCTCGAGGCTGCCCCCTGTCCCTTGAAGACTTGCTGTATGTCCCACCACCCCTCAAGGTCAACCTGG
TGGTGCTGTTGGCTGAGATGTATATGTGCTTTGAGGTTCTGAAGCCTGATTTTGTGCAGGCCAAAGACTT
GCCTGATGGACATGTAGCTGTCTCCCCCCGGAATACAGAGACTGTTCCATCTCAGAACAACAGTGGCAGC
AGTTCTCCTGTCTTCAACTTCCGTCACCCACTTCTGTCACCTGGTGGTCCCCAGTCTCCACTCCGAGGAT
CCACAGGCTCCCTGAAGTCCTCTCCATCAATGTCTCACATGGAGGCTCTTGGCAAAGCCTGGAACCGTCA
GCTTAGCCAGGTGCCTGTACAGACTCGCTCCTCTATCCTCCTGTCGGAGGGGACACCTCCCGAGGAGCCC
ACCACCAAGCCTGCCCTCATTGAGATCCCTCTAGCCAGCCTGGGGGAGCCTGCTGCTGATGAGGAAGGAG
ATGGGAGCCCCCCTGGGGCTGAGGATTCCTTAGAGGAAGAGGCATCTTCTGAGGGAGAGCCCCGATCAGG
GCTTGGATTCTTTTATAAGGACGAAGACAAGCCTGAGGATGAGATGGCTCAGAAGCGAGCTAGCCTGCTG
GAGCGTCAGCAGAGGCGGGTAGAGGAAGCCCGGCGGCGCAAACAGTGGCAGGAGGCAGAGAAGGAGCAGA
AACGGGAGGAGGCCGCCAGGCTGGCTCAGGAGGCTCCAGGCTTGGCCTTTACAACTCCTGTTGTAGCCTC
TGCGGCTCCAGTGGCCACCTTGGCTCCTACTACCAGAGCCATGGCCCCAGCTGAGGAGGAGGTGGGCCCC
CGGCGGGGGGACTTCACAAGACTTGAGTATGAACGCCGGGCACAACTGAAACTGATGGATGACCTTGATA
AGGTGCTACGGCCCCGGGCCTCAGGGACCGGGGGACCAGGGCGGGGCGGGCGCAGGGCCACCCGGCCACG
CTCTGGTTGCTGTGATGACTCGGCCTTGGCACGAAGCCCAGCCCGCGGCCTGCTGGGTTCACGGCTCAGC
AAGGTCTATTCCCAGTCCACGCTGTCCCTATCTACGGTGGCCAACGAGGCTCCCAATAACCTTGGTGTGA
AGAGGCCCACCTCTCGGGCCCCTTCTCCATCAGGCCTCATGTCTCCAAGCCGCCTGCCTGGCAGTCGAGA
ACGTGACTGGGAGAATGGAAGCAATGCATCCTCCCCAGCATCAGTGCCTGAGTACACAGGTCCCCGGCTA
TACAAGGAACCCAGCGCCAAGTCTAACAAGTTTATCATCCACAATGCCTTGTCACACTGCTGCCTGGCAG
GCAAGGTGAATGAGCCCCAGAAGAACAGAATTCTAGAGGAAATCGAGAAAAGCAAGGCCAACCACTTCCT
GATTCTCTTTCGGGACTCAAGCTGCCAGTTCCGGGCCCTCTACACTCTGTCTGGGGAGACAGAGGAGCTA
TCGAGGCTGGCAGGCTATGGGCCTCGGACCGTCACTCCTGCCATGGTCGAAGGCATCTATAAGTACAACT
CGGATCGCAAACGGTTCACCCAGATCCCTGCTAAAACCATGTCTATGAGTGTAGACGCCTTCACTATCCA
GGGACACCTTTGGCAAAGCAAGAAGCCCACCACGCCCAAGAAGGGTGGCGGTACCCCCAAATAG

Translation (837 aa):
MVEAAPAGSGPLRRTFLVPEIKSLDQYDFSRAKAAASLAWVLRAAFGGAEHVPPELWEPFYTDQYAQEHV
KPPVTRLLLSAELYCRAWRQALPQLEPSPSPSALLALLARRGTVPSLPEHPVREADLKHQPILMGAHLAV
IDALMVAFSFEWTKTLPGPLALSSLEHKLLFWVDTTVRRLQEKTEQEAAQRASPAAPLDGASPAQPSIRY
RKDRAIARRAPCFPNVTTLQDLASGAALAATIHCYCPQLLRLEEVCLKDPMSVADSLYNLQLVQDFCASH
LPRGCPLSLEDLLYVPPPLKVNLVVLLAEMYMCFEVLKPDFVQAKDLPDGHVAVSPRNTETVPSQNNSGS
SSPVFNFRHPLLSPGGPQSPLRGSTGSLKSSPSMSHMEALGKAWNRQLSQVPVQTRSSILLSEGTPPEEP
TTKPALIEIPLASLGEPAADEEGDGSPPGAEDSLEEEASSEGEPRSGLGFFYKDEDKPEDEMAQKRASLL
ERQQRRVEEARRRKQWQEAEKEQKREEAARLAQEAPGLAFTTPVVASAAPVATLAPTTRAMAPAEEEVGP
RRGDFTRLEYERRAQLKLMDDLDKVLRPRASGTGGPGRGGRRATRPRSGCCDDSALARSPARGLLGSRLS
KVYSQSTLSLSTVANEAPNNLGVKRPTSRAPSPSGLMSPSRLPGSRERDWENGSNASSPASVPEYTGPRL
YKEPSAKSNKFIIHNALSHCCLAGKVNEPQKNRILEEIEKSKANHFLILFRDSSCQFRALYTLSGETEEL
SRLAGYGPRTVTPAMVEGIYKYNSDRKRFTQIPAKTMSMSVDAFTIQGHLWQSKKPTTPKKGGGTPK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH