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Report for CCDS87699.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87699.1 Public Homo sapiens 9 FNBP1 24 110 108 CCDS HistoryNCBI Gene:23048Re-query CCDS DB by CCDS ID:87699.1Re-query CCDS DB by GeneID:23048See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87699.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355681.3 ENSP00000347907.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000355681.3Link to Ensembl Protein Viewer:ENSP00000347907.3Re-query CCDS DB by Nucleotide ID:ENST00000355681Re-query CCDS DB by Protein ID:ENSP00000347907
Original member Current member NCBI NM_001363755.1 NP_001350684.1 Accepted alive Link to Nucleotide Sequence:NM_001363755.1Link to Protein Sequence:NP_001350684.1Re-query CCDS DB by Nucleotide ID:NM_001363755Re-query CCDS DB by Protein ID:NP_001350684Link to BLAST:NP_001350684.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001350684.1 592 Q96RU3-3 592 100% 0 0

Chromosomal Locations for CCDS 87699.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 129895818 129895996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 129899965 129900101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 129900426 129900547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 129902869 129903001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 129908890 129908999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 129915966 129915980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 129923844 129923939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 129924960 129925157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 129927195 129927341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 129929567 129929695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 129957360 129957464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 129958491 129958553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 129978465 129978612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 129979318 129979374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 129994843 129994958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130042952 130042975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1779 nt):
ATGAGCTGGGGCACCGAGCTCTGGGATCAGTTTGACAACTTAGAAAAACACACACAGTGGGGAATTGATA
TT
CTTGAGAAATATATCAAGTTTGTGAAAGAAAGGACAGAGATTGAACTCAGCTATGCAAAGCAACTCAG
G
AATCTTTCAAAGAAGTACCAACCTAAAAAGAACTCGAAGGAGGAAGAAGAATACAAGTATACGTCATGT
AAA
GCTTTCATTTCCAACCTGAACGAAATGAATGATTACGCAGGGCAGCATGAAGTTATCTCCGAGAACA
TG
GCATCACAGATCATTGTGGACTTGGCACGCTATGTTCAGGAACTGAAACAGGAGAGGAAATCAAACTT
T
CACGATGGCCGTAAAGCACAGCAGCACATCGAGACTTGCTGGAAGCAGCTTGAATCTAGTAAAAGGCGA
TTT
GAACGCGATTGCAAAGAGGCGGACAGGGCGCAGCAGTACTTTGAGAAAATGGACGCTGACATCAATG
TC
ACAAAAGCGGATGTTGAAAAGGCCCGACAACAAGCTCAAATACGTCACCAAATGGCAGAGGACAGCAA
A
GCAGATTACTCATCCATTCTCCAGAAATTCAACCATGAGCAGCATGAATATTACCATACTCACATCCCC
AAC
ATCTTCCAGAAAATACAAGAGATGGAGGAAAGGAGGATTGTGAGAATGGGAGAGTCCATGAAGACAT
AT
GCAGAGGTTGATCGGCAGGTGATCCCAATCATTGGGAAGTGCCTGGATGGAATAGTAAAAGCAGCCGA
A
TCAATTGATCAGAAAAATGATTCACAGCTGGTAATAGAAGCTTATAAATCAGGGTTTGAGCCTCCTGGA
GAC
ATTGAATTTGAGGATTACACTCAGCCAATGAAGCGCACTGTGTCAGATAACAGCCTTTCAAATTCCA
GA
GGAGAAGGCAAACCAGACCTCAAATTTGGTGGCAAATCCAAAGGAAAGTTATGGCCGTTCATCAAAAA
A
AATAAGTCTCCCAAGCAGCAAAAGGAACCCCTCTCCCATCGCTTCAACGAGTTCATGACCTCCAAACCC
AAA
ATCCACTGCTTCAGGAGCCTAAAGCGTGGGCTTTCTCTCAAGCTGGGTGCAACACCGGAGGATTTCA
GC
AACCTCCCACCTGAACAAAGAAGGAAAAAGCTGCAGCAGAAAGTCGATGAGTTAAATAAAGAAATTCA
G
AAGGAGATGGATCAAAGAGATGCCATAACAAAAATGAAAGATGTCTACCTAAAGAATCCTCAGATGGGA
GAC
CCAGCCAGTTTGGATCACAAATTAGCAGAAGTCAGCCAAAATATAGAGAAACTGCGAGTAGAGACCC
AG
AAATTTGAGGCCTGGCTGGCTGAGGTTGAAGGCCGGCTCCCAGCACGCAGCGAGCAGGCGCGCCGGCA
G
AGCGGACTGTACGACAGCCAGAACCCACCCACAGTCAACAACTGCGCCCAGGACCGTGAGAGCCCAGAT
GGC
AGTTACACAGAGGAGCAGAGTCAGGAGAGTGAGATGAAGGTGCTGGCCACGGATTTTGACGACGAGT
TT
GATGATGAGGAGCCCCTCCCTGCCATAGGGACGTGCAAAGCTCTCTACACATTTGAAGGTCAGAATGA
A
GGAACGATTTCCGTAGTTGAAGGAGAAACATTGTATGTCATAGAGGAAGACAAAGGCGATGGCTGGACC
CGC
ATTCGGAGAAATGAAGATGAAGAGGGTTATGTCCCCACTTCATATGTCGAAGTCTGTTTGGACAAAA
AT
GCCAAAGGTGCTAAGACTTATATTTAA


Translation (592 aa):
MSWGTELWDQFDNLEKHTQWGIDILEKYIKFVKERTEIELSYAKQLRNLSKKYQPKKNSKEEEEYKYTSC
K
AFISNLNEMNDYAGQHEVISENMASQIIVDLARYVQELKQERKS
NFHDGRKAQQHIETCWKQLESSKRR
F
ERDCKEADRAQQYFEKMDADINVTKADVEK
ARQQAQIRHQMAEDSKADYSSILQKFNHEQHEYYHTHIP
N
IFQ
KIQEMEERRIVRMGESMKTYAEVDRQVIPIIGKCLDGIVKAAESIDQKNDSQLVIEAYKSGFEPPG
D
IEFEDYTQPMKRTVSDNSLSNSRGEGKPDLKFGGKSKGKLWPFIKKNK
SPKQQKEPLSHRFNEFMTSKP
K
IHCFRSLKRG
LSLKLGATPEDFSNLPPEQRRKKLQQKVDELNKEIQKEMDQRDAITKMKDVYLKNPQMG
D
PASLDHKLAEVSQNIEKLRVETQKFE
AWLAEVEGRLPARSEQARRQSGLYDSQNPPTVNNCAQDRESPD
G
SYTEEQSQESEMKVLATDFDDEFDDEEPLPAIGTCKALYTFE
GQNEGTISVVEGETLYVIEEDKGDGWT
R
IRRNEDEEGYVPTSYVEVCLDKNAKGAKTYI




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser